Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0063 ATGGAAGGGACTCAAGCAAAGGAGGAAACCCTACCACCAGGATTTCGGTTTCATCCAACCGATGAAGAACTCATCTCTTACTATCTCACAAACAAGATATCGGATTCTAATTTTACAGGCAAAGCAATAGCTGATGTAGATCTCAACAAATGTGAACCATGGGAGCTACCAGGGAAAGCAAAGATGGGACAAAAAGAATGGTACTTCTTCAGTTTAAGAGATCGTAAATACCCAACGGGTGTAAGAACCAATCGAGCAACGAACACTGGATACTGGAAAACCACAGGGAAAGACAAAGAGATACTCAACAGTGTTACGTCGGAGTTGGTTGGTATGAAGAAGACTTTGGTGTTCTACAAAGGCAGGGCTCCCAGAGGAGAGAAAACCAATTGGGTCATGCATGAATACCGCATTCATTCTAAATCCAGCTTCAGATCCAACAAGCAAGATGAATGGGTGGTTTGCCGAGTGTTCCGCAAGAGTGCTGGTGCAAAGAAGTACCCATCTTCCAACCACACCAGAGCAGTGAATTCTTATAATCTTGAAGTTGGTCCAAGCATCGTGCCACAACCAATGATGCACTTGGCAGATCATGCTTCTCATCACTTCTTTTATGGAAGAAATTACATGATGAGTAGTGCAGAGCTAGCTGAAGTCACAAGGGTCTTAAGAAGTGGTGGATCAAACAGTGTTAATCTACCAATGCAATCCCATCTGAACAATCCGATAGGAGGAGGAGGAGGAGGATTCACCATTTCAGGCCTTAATTTGAATCTAGGGGGTGGAACAGTGCCTTCAACACAACCCATCTTGAGGCCAATAATGCCTCTACCTCAGCCATCTCCTACTCACACAGTGCCTCATCAAGTGCATGATTTCGGTTCCAACATGATCACAGCCAATGCTCTTGCTTCAGAAAATGTAGGGTATGGTGCAGACATGAGCAATGCAAATCCTCACGGCAATAGGTACATGCCCATGGACCATGTCATGGATCTAGATAATTACTGGCCTTCCTACTAA 1023 0.4448 MEGTQAKEETLPPGFRFHPTDEELISYYLTNKISDSNFTGKAIADVDLNKCEPWELPGKAKMGQKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSFRSNKQDEWVVCRVFRKSAGAKKYPSSNHTRAVNSYNLEVGPSIVPQPMMHLADHASHHFFYGRNYMMSSAELAEVTRVLRSGGSNSVNLPMQSHLNNPIGGGGGGFTISGLNLNLGGGTVPSTQPILRPIMPLPQPSPTHTVPHQVHDFGSNMITANALASENVGYGADMSNANPHGNRYMPMDHVMDLDNYWPSY* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0063 340 ProSiteProfiles NAC domain profile. 11 160 IPR003441 GO:0003677|GO:0006355
Apr9g0063 340 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 337 - -
Apr9g0063 340 SUPERFAMILY NAC domain 6 160 IPR036093 GO:0003677|GO:0006355
Apr9g0063 340 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Apr9g0063 340 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Apr9g0063 340 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0063 Apr-Chr9 836458 838828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0063 5 340 NAC Transcription Factor Family AT2G24430 51.541 2.57e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr9g0063 NAM 2.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0063 - - gmx:100811175 554.288