Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0041 ATGGAGAGGCTCGTCGGAGGAAAGTATCAAATCGGTCAAAAAATTGGCAGCGGATCATTCGGACAAATTCACATTGGGGCACATATCGAAACTTCTGACATTGTGGCCATAAAGATGGAGAACAGGAAAACCAATCATCCACAGCTAATGTATGAGGCAAAGTTATATAATAATCTTCAAGGAGGAAGTGGCATTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAATAATGTTCTTGTTATTGAACTTCTGGGACCCAGTCTTGAAGATTTCTTTTTCTTCTGTGAGGGCAAATTTTCACTCAAAACAGTTTTGATGCTGGCTGATCAGTTGCTTTCAAGGATAGAGTATTTGCATTCGAAGGGTTATTTGCACAGAGACATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGGATATAGGGACCCTATTACAAACAAGCATATCCCTTACAGAGAGAACAAATGCTTAACAGGGACTGCACGTTATGCAAGTTATAATACACACCGAGGAATTGAACAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGCAAGCTGCCACCAAAGAGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCTATTGAGATTCTTTGCAAGTCATATCCTGTGGAGTTTGCTTCTTACTTTCATTATTGCCGCTCCCTGACATTTGATCAACGGCCAGATTATGGACTTTTGAAGCGCCTGTTTCGCAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACGATTCTAAAATATCAGCAGATGCAACTGCAAAAGGCCAAAAGTCAATCAACTCCTCCAGTTGCTGTACCTACCGGCCTTGAACCAGTGGATATGGATAATAATAATAAAGGAGTCAATGATTCCTCTCAAATTGCTGTGGCAACACTATCTAACAAAGTCGATAGTTCACGTGTTCGGATGAAGACAATGGTATCTAATGCTCAGAATGCCAAGACTCCAACAGAGAAACATGTATACATCCTGATGAAAATTTCACAGTTGTTTTCTTTACTCTATCCATTTTTTCATAAACAAAAGGAATTAACTTATATTTTGGTTCCTTTAAATGTGTTTCAGTCATAG 1215 0.3885 MERLVGGKYQIGQKIGSGSFGQIHIGAHIETSDIVAIKMENRKTNHPQLMYEAKLYNNLQGGSGIPRMKWCGTDGDNNVLVIELLGPSLEDFFFFCEGKFSLKTVLMLADQLLSRIEYLHSKGYLHRDIKPDNFLMGLGKKANQVYMIDFGLAKGYRDPITNKHIPYRENKCLTGTARYASYNTHRGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATKEQKYDKICKKKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLFRNLFTRAGYDSDYLFDWTILKYQQMQLQKAKSQSTPPVAVPTGLEPVDMDNNNKGVNDSSQIAVATLSNKVDSSRVRMKTMVSNAQNAKTPTEKHVYILMKISQLFSLLYPFFHKQKELTYILVPLNVFQS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0041 404 Gene3D Transferase(Phosphotransferase) domain 1 1 343 - -
Apr9g0041 404 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Apr9g0041 404 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0041 404 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0041 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Apr9g0041 404 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Apr9g0041 404 PANTHER CASEIN KINASE-RELATED 1 368 - -
Apr9g0041 404 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 368 - -
Apr9g0041 404 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0041 Apr-Chr9 557906 564046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0041 9 236 AGC Kinase Gene Family AT3G08730 25.862 4.22e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Apr9g0041 Pkinase 1.8e-27 CL0016