Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0030 ATGCCTGAACTCCGAAGCAGAAAGCGCCCAAACCCAAACCCAAGCCCAAGCCCAAACCCAAACCCAAACCCGACTCCGATAACCCAACCCGTAAGAACAATCCGCCAGAGGAGAACCCGAAGAACCACCGTAAGAAATAATCGTAACGCGATCGCAGGTGATCAAATCAATAACAACCGCCAAATACATCAGCAACGACAAGAACAGGACGCACTTCCGCTTAGGGTCCTCAAAGAGGAAAATAAAGCGATGGATAACGAACACGACAGCGGTGGCCGGAGCGCTGACAAAGCTCCGGCTGCCGAAGACGAAGGAAGCACCACTCCCCTTCCCGAGAGGGTGCAGGTAGGTGGTTCACCGTTATACAGAATAGAGAGAAAACTTGGCAAGGGAGGGTTTGGACAAGTCTATGTTGGTCGGCGAGTCGGAGCCGGTGCCGGAGCGGTAGAGGTAGCTTTGAAGTTTGAACATAGAAGCAGTAAGGGGTGTAATTATGGGCCTCCTTATGAGTGGCAGGTTTACAATTCATTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTACAAGGGACGGCAAGGTGATTACTATGTTATGGTTATGGATATACTTGGCCCTAGTCTATGGGATGTTTGGAATAACAACACAAACACGATGTCTGCAGAAATGGTGGCATGTATAGCAATTGAGGCTATCTCCATTTTAGAGAAGATGCACTCTAGAGGATATGTACACGGTGATGTCAAACCTGAGAACTTTTTGCTTGGCCCCCCAGGAACTTCTGATGAGAAAAAGCTTTTTCTGGTTGATCTTGGATTAGCAACCCGATGGCGGGATAGTTCAACTGGCCTTCATGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGTAGGAGAGATGATTTGGAGTCTCTTGCTTACACTCTAATCTTCCTTCTTCGTGGTCGACTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGGCACTTCACCAGAAGCTTTGTGTTGCTTTTGTCCTCCACCTTTTCGGCAGTTTGTTGAATATGTGGTAAATTTGAAGTTTGATGAAGAACCAAATTACGCAAAGTACATATCACTGTTTGATGGAATTGTTGGTCCAAATCCAGACATCAGACCCCTAAACACTGATGGTGCACAGAAGCTTATATATATGGTTGGACATAAGAGAGGACGTTTGACTGTGGAAGAAGATGATGATGAACAACCGAAGAAGAAGGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTATATAATGCTCACCGACCAATGAAGCAAAGGTACCATTACAATGTTGCTGACATGCGGCTGTCCCAACACATTGAGAAGGGATATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGCTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTTGCTGCACAAGTTTATGAGCTCTCACCTCACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAGAATTATTACATTAGTGCCATAGCAGGAGCTAATAATGGGAGCTCATTGGTTGTGATGTCTAAAGGGACCCAATACTTGCAACAATCCTATAAAGTCAGTGAGTCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGATTTTACGTCACTGCTATGGCCACTGCCGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGCATTCATCGAAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCTACATGGGACCAAGCTGCTTTTGTTCTTAGTGTTCCGAGAAGAAAACCAGCTGATGAAACTCAAGAGACACTCCGCACTTCTGCCTTTCCTGGTACTCATGTCAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATATGCTATGGGCGAACAGTTTCATGA 2049 0.4514 MPELRSRKRPNPNPSPSPNPNPNPTPITQPVRTIRQRRTRRTTVRNNRNAIAGDQINNNRQIHQQRQEQDALPLRVLKEENKAMDNEHDSGGRSADKAPAAEDEGSTTPLPERVQVGGSPLYRIERKLGKGGFGQVYVGRRVGAGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNSLGGSHGVPRVHYKGRQGDYYVMVMDILGPSLWDVWNNNTNTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPEALCCFCPPPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPLNTDGAQKLIYMVGHKRGRLTVEEDDDEQPKKKVRMGMPATQWISVYNAHRPMKQRYHYNVADMRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFAAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPGTHVKEKWAKNLYIASICYGRTVS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0030 682 MobiDBLite consensus disorder prediction 7 27 - -
Apr9g0030 682 Gene3D Transferase(Phosphotransferase) domain 1 86 436 - -
Apr9g0030 682 MobiDBLite consensus disorder prediction 45 68 - -
Apr9g0030 682 SUPERFAMILY Protein kinase-like (PK-like) 122 396 IPR011009 -
Apr9g0030 682 PANTHER CASEIN KINASE-RELATED 88 656 - -
Apr9g0030 682 PANTHER - 88 656 - -
Apr9g0030 682 MobiDBLite consensus disorder prediction 1 71 - -
Apr9g0030 682 MobiDBLite consensus disorder prediction 83 100 - -
Apr9g0030 682 ProSiteProfiles Protein kinase domain profile. 122 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0030 682 Pfam Protein kinase domain 122 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0030 682 MobiDBLite consensus disorder prediction 83 118 - -
Apr9g0030 682 ProSitePatterns Protein kinases ATP-binding region signature. 128 154 IPR017441 GO:0005524
Apr9g0030 682 CDD STKc_CK1 122 391 - -
Apr9g0030 682 SMART serkin_6 122 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0030 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0030 Apr-Chr9 406920 411693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0030 121 277 EF-hand Containing Proteins AT2G17290 29.448 6.94e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Apr9g0030 Pkinase 8.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0030 - - vvi:100254265 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0030 9 406920 411693 Apr9g0030 9 406920 411693 ECH
Apr5g1086 5 15501486 15510302 Apr9g0030 9 406920 411693 ECH
Apr5g1086 5 15501486 15510302 Apr9g0030 9 406920 411693 PCT