Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2824 ATGGGCATAGAGGAGCAATTATCGTTGGGACAGAATAGAAACCCAGGTGAGGGCGAAGCAGACGGAAAGAGCAACGGCGTGGATGGTAGGGCGGAGGGCGGAGATGAGGGAGGGAAAGCGCCGAGACTGCCTCGGTGGACAAGACAAGAGATTCTGGTTCTGATACAGGGAAAGAGAGACGCAGAGAATAAGTTTAGGAGGGGTCGCACAGCCGGATTGGCATTCGGGTCGGGTCAGGTGGAGCCTAAATGGGCATCCGTCTCTTCTTACTGCAGAAAGCACGGAGTGAACAGGGGTCCAGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAAGAATGGGAGTCTCACATAAGGGAGGAGTCGGAATCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCCGGATTTTTCGACAAGGAGGTCTATGATATTCTAGACTCAGGCACTGCCTCGCAACTTCCCGCTTTAGCTCTATCTCTTTCATCGCCCAATGACAACAAAGACAAGGACATCAAAGACAAGGACAGCAAAGCTGAGGAGCCACACCTCTACGACAGTAATCGCAACACCGCTGGTGACGATGGCTTGTTCTCCGACTTTGAACAAGAAGAAGTGGGTGCCACTCCCGATAAGAAGGACATTCCTATTCCTTCTCCCATTCCTATCTCAGAGAAGCAATATCAACCCCTCCTCCGTGCCTGCCAAGGTCAAGGTGTGAGTAACGAGAAACAGCCTACTTCAAATCCAGAAATGGGTTCCACATCTCAAGGAGAGCGGAAAAGGAAGCGGCTAGCAACTGATGGAGAGGAGGAAACTTTGCAATATCAGCTAATTGATGTCTTAGAAAGAAACGGCAAGATGCTAAGTTCTCGACTTGAAGCTCAAAACATAAATTTCCAGCTGGACCGCGAACAGCGGAAAGACCATGCAAGTAACTTGGTTGCAGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTGTAG 1029 0.4947 MGIEEQLSLGQNRNPGEGEADGKSNGVDGRAEGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLAFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESHIREESESFWVMRNDLRRERKLPGFFDKEVYDILDSGTASQLPALALSLSSPNDNKDKDIKDKDSKAEEPHLYDSNRNTAGDDGLFSDFEQEEVGATPDKKDIPIPSPIPISEKQYQPLLRACQGQGVSNEKQPTSNPEMGSTSQGERKRKRLATDGEEETLQYQLIDVLERNGKMLSSRLEAQNINFQLDREQRKDHASNLVAVLDKLADALGRIADKL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2824 342 MobiDBLite consensus disorder prediction 247 279 - -
Apr8g2824 342 MobiDBLite consensus disorder prediction 167 207 - -
Apr8g2824 342 MobiDBLite consensus disorder prediction 23 43 - -
Apr8g2824 342 Pfam Myb/SANT-like DNA-binding domain 45 134 IPR044822 -
Apr8g2824 342 CDD GT1 44 118 - -
Apr8g2824 342 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 342 - -
Apr8g2824 342 MobiDBLite consensus disorder prediction 176 198 - -
Apr8g2824 342 ProSiteProfiles Myb-like domain profile. 45 111 IPR001005 -
Apr8g2824 342 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 342 - -
Apr8g2824 342 MobiDBLite consensus disorder prediction 247 265 - -
Apr8g2824 342 Coils Coil 338 342 - -
Apr8g2824 342 MobiDBLite consensus disorder prediction 1 44 - -
Apr8g2824 342 Gene3D - 46 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2824 Apr-Chr8 37516616 37519894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2824 29 142 Trihelix Transcription Factor Family AT1G13450 31.897 1.57e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr8g2824 Myb_DNA-bind_4 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2824 - - gmx:100797767 499.975