Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2818 ATGGGTTGTTTTTCGTGTTTCGATTCGAGGGAGGATGAGAAGCTCAATCCCAATCCTGAGCGGGAAATCCATCATCACGATAATGATCATCATAAGTTCCCCGACCCCCCTCACATGTCCCGATTGCCTTCTGCATCTGCCTCTGCCTCTGCCTCTGGAGCAGACAAGCTACGCTCAACGAGTAATAGTAATGGGAACGGGGCCTCCAAAAGGGAATTGGCTTCTCTCAAGGATGGACCAGCTGTTCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCCGCCGCAACCAAAAACTTCAGGCCTCAGTCCTTTATAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGCCGCCTTGAAACTACGGGTCAGGTTGTTGCTGTTAAACAGTTAGATAGAAATGGCCTCCAGGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTAAATCTCATTGGATACTGTGCAGATGGAGACCAACGCCTCTTAGTTTATGAATTTATGCCTTTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGACAAGGAGCCATTAGATTGGAACACCAGGATGAAAATTGCTGCTGGAGCGGCAAAAGGATTGGAATACCTTCATGACAAAGCAAATCCTCCCGTCATTTATAGAGACTTCAAATCATCTAATATATTACTTGACGAAGGTTTTCATCCAAAGCTTTCAGACTTTGGGCTTGCAAAGCTTGGTCCTGTTGGAGATAAATCACACGTTTCCACCCGGGTCATGGGAACTTATGGTTACTGTGCTCCTGAATATGCTATGACTGGACAACTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTAGTGTTCTTGGAGCTGATTACTGGCCGCAAAGCTATTGACAGCACCCGGCCCCACGGAGAACAAAACCTTGTCACATGGGCACGTCCGCTGTTCAATGACCGCAGGAAGTTTCCGAAGTTAGCAGATCCACAGCTGCAAGGGCGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCAGCAGCACGTCCTCTAATTGGGGATGTGGTGACGGCACTCTCTTTTCTGGCTAACCAAGCATATGACCATAACAATGCTGGGCATGGTTATCGGGGAACCGGGGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATTGAAAAATGATGACGGTGGAGGATCCGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGCTAAACAGGGATCTTGATAGAGAACGAGCCGTTGCTGAAGCCAAGATGTGGGGTGAAAACTGGAGAGAAAAAAGAAGACAAAGTGCCCAGGGCAGTTTTGATGGCTCAAATGCCTAG 1434 0.477 MGCFSCFDSREDEKLNPNPEREIHHHDNDHHKFPDPPHMSRLPSASASASASGADKLRSTSNSNGNGASKRELASLKDGPAVQIAAQTFTFRELAAATKNFRPQSFIGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPQLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDHNNAGHGYRGTGDDKRNRDDKGGRILKNDDGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDGSNA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2818 477 SUPERFAMILY Protein kinase-like (PK-like) 82 377 IPR011009 -
Apr8g2818 477 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 472 - -
Apr8g2818 477 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2818 477 PANTHER OS07G0668900 PROTEIN 1 472 - -
Apr8g2818 477 Gene3D Phosphorylase Kinase; domain 1 62 177 - -
Apr8g2818 477 MobiDBLite consensus disorder prediction 391 443 - -
Apr8g2818 477 CDD STKc_IRAK 107 375 - -
Apr8g2818 477 MobiDBLite consensus disorder prediction 7 37 - -
Apr8g2818 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Apr8g2818 477 Pfam Protein kinase domain 104 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2818 477 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Apr8g2818 477 MobiDBLite consensus disorder prediction 43 70 - -
Apr8g2818 477 MobiDBLite consensus disorder prediction 1 74 - -
Apr8g2818 477 Gene3D Transferase(Phosphotransferase) domain 1 178 394 - -
Apr8g2818 477 MobiDBLite consensus disorder prediction 386 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2818 Apr-Chr8 37468290 37475090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2818 1 465 Glycoside Hydrolase AT3G07070 55.839 1.21e-172 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr8g2818 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2818 K13430 - gmx:100777987 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2818 8 37468290 37475090 Apr8g2818 8 37468290 37475090 ECH