Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2817 ATGGACAAGTCGTGGAGCTTCGCACCAAGAAAGAGTAACGTTGGGAGCGTTCTGGAGGATGTGGATGTTCCAGATTGCGTTGGCGTGTTGCCCAAATTGCTGGATAAATACGAGAGTGGGAGAAGCAAGTTTGGGGAGGAGGCAGAGGATGACAAATCCTTTCTGGATGCACTCCAAGCCATCTCCAAACTCTGTCTCTGTGATACCAGTTTGAGTGCCTTGGACGCCCAAGAAAAAGCCATGTCTTTCTTGGAGACGGAGCTGTGCCTTCTTCTCGACCATCCCAAATCCAAAACACCCAAGAAATCATTCTCCTTTGGTTCCCATCCTTCGCATGATTCCCCCGTTCCCGATAACGACTCCCCCAAGCTACCACCCCAGGATCACCATGATCATCATGCGAACGAGGACTTCCCACCTAATTTCTCCGCACAAAAGCGTTCCGTTCTTAAAAAGATCGCCTCTGCCATGATCGCCGCCGGCTATCAAACAGAGTGCTGCATGGCTTTCGCCGCCTTCAGGCGAACTGCTTTCAAAACAGCCCTCCAAAGATTCGGATACCGGAGCGTCAGAATGGAAGATGTCTATAAAATGCAGTGGGAATCGCTGGAAGGAGAAATTGCCACGTGGAACAAAGTGGTTGGGCATTCCACCACCGTCCTCTTTAGCGCCGAACGAAGGCTCTATGACTCAGTCTTCCACGACCACCCCTCCATATCTCAGAACCTTTTCAGCGATCTTGTTCGGGCTGTCATCGTCCATTTACTGAATTTCGTACACGGCGCCGTTTTAACGAAGCAATCAGCGGAGAAGCTGTTCAAATTCCTGGATATGTACGAGACCCTGAGGGACGTGGAGCCTGCCATTACTGGCGCTTCGTATTCGGAGCAGTGTGCGAAGGAGTTGGCGTATGAGGTGGCGACGGCGAAGGATAGGGTAGCGGAGGCTGTGGTGGGCATGTTCTGTGATTTGGAGAATTCCATTAAGAGCGACAACCAAAGGATTCCTGTCCCCAACGGCGCAGTTCACCCGTTGACTCGTTATGTGATGAATTATCTTGAATATGCATGCGAATACAAAGACACGTCGGAGCAGGTGTTTGAGCGATGTGTGGGTGTTAAGGGGATTGGGATTGGAATTGAAAGCCATAAATCCATAGACGAGGAGGGCGATGATGGGACGGGCAATAAATCGGCTTTTGCGCTTCAATTTAAGACAGTGATGGAGCTCTTGGATGCAAATGTTGAGAGGAAGTCGAGGTTGTATAAGGATCCGGCTTTGCGCTATGTTTTCCTAATGAACAATGGGAGATACATAGTGCAGAAAATGAAAGGATGCGCGGAGCTTCACAAATTGATGGGTGACAATTGGTGCAGGAGAAGGCAATCGAGGTTGAGGTTGTACCATAAATGTTATCAGAGGGAGACTTGGAGTAAGGTGTTGCAGTGCCTTAACCCGGAGGGTCTAAAAGGGAATGGGAACAAGGTTTCTAAACAGCTTCTCAAGGAGAGGTTTAAGAGCTTCAACTCCATGTTTGAAGATATACACAAGAAGCAGCGTACGTGGATGGTCAGTGACGAGCAACTTCAATCCGAACTCAGGGTTTCCATAACGGCTTTGGTCATCCCTGCCTACCGTTCCTTCGTTGGAAGATTCAAACACCATCTTGAATCACCTAGACATGTTGACAAGTATATCAAGTATCATCCCGACGACATTGAGATTTTCATTCACCATTTTTTTGATGGTAATGCTCCCTCCATCCCCCGAAAGAGGACGTGA 1782 0.4882 MDKSWSFAPRKSNVGSVLEDVDVPDCVGVLPKLLDKYESGRSKFGEEAEDDKSFLDALQAISKLCLCDTSLSALDAQEKAMSFLETELCLLLDHPKSKTPKKSFSFGSHPSHDSPVPDNDSPKLPPQDHHDHHANEDFPPNFSAQKRSVLKKIASAMIAAGYQTECCMAFAAFRRTAFKTALQRFGYRSVRMEDVYKMQWESLEGEIATWNKVVGHSTTVLFSAERRLYDSVFHDHPSISQNLFSDLVRAVIVHLLNFVHGAVLTKQSAEKLFKFLDMYETLRDVEPAITGASYSEQCAKELAYEVATAKDRVAEAVVGMFCDLENSIKSDNQRIPVPNGAVHPLTRYVMNYLEYACEYKDTSEQVFERCVGVKGIGIGIESHKSIDEEGDDGTGNKSAFALQFKTVMELLDANVERKSRLYKDPALRYVFLMNNGRYIVQKMKGCAELHKLMGDNWCRRRQSRLRLYHKCYQRETWSKVLQCLNPEGLKGNGNKVSKQLLKERFKSFNSMFEDIHKKQRTWMVSDEQLQSELRVSITALVIPAYRSFVGRFKHHLESPRHVDKYIKYHPDDIEIFIHHFFDGNAPSIPRKRT* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2817 593 MobiDBLite consensus disorder prediction 123 137 - -
Apr8g2817 593 MobiDBLite consensus disorder prediction 101 115 - -
Apr8g2817 593 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 17 584 - -
Apr8g2817 593 Gene3D Exocyst complex component Exo70 37 591 - -
Apr8g2817 593 MobiDBLite consensus disorder prediction 101 141 - -
Apr8g2817 593 PANTHER EXOCYST COMPLEX PROTEIN EXO70 17 584 IPR004140 GO:0000145|GO:0006887
Apr8g2817 593 SUPERFAMILY Cullin repeat-like 45 582 IPR016159 -
Apr8g2817 593 Pfam Exo70 exocyst complex subunit 210 577 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2817 Apr-Chr8 37464891 37467095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2817 33 592 EXO70 exocyst subunit family AT5G13150 51.468 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2817 K07195 - gmx:100784339 762.681