LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr8g2815	ATGGCGGCTTCATCTGCAATTACTACGCTAAGGCTGGCAAATATTCCAGAAAGCAGAGGCAGAGTGGGAGCTTTGAACCCTAACACTAACCCTAAGTTTAGTGGTGCTGTGGGGGGGCTTGGGTTTGGGTTTGGGTTTGGTGTTTGTTCTCCACAGCCACTGTCAGTGAGTGTGGGACAGAGAAAAGAAAGCGTCCTGCTCCTTCCGGGTACGGGTAGGAGTAGGGTAAGGGCGAGTTCTGCTTCTGAGGAGCCGAGTGTGCAGTCAAAAGTGACTCAGAAAGTTTACTTCGACATAAGCATTGGAAATCCAGTTGGGAAGCTCGCGGGACGGATCGTCATTGGACTCTATGGTGACGATGTACCCCAAACATCAGAGAACTTTCGTGCCCTTTGTACTGGCGAGAAGGGCTTCGGCTACAAGGGCTCCACCTTCCATCGCGTCATCAAGGATTTCATGATTCAAGGAGGCGACTTCGACAAAGGAAATGGAACTGGAGGCAAAAGCATATATGGTCGTACTTTCAAAGATGAGAATTTTAAATTGTCTCATACTGGACCAGGAGTTGTTAGCATGGCAAATGCAGGTCCCAACACAAATGGGAGCCAGTTTTTCATATGCACTGTGAAGACACCATGGCTGGATCAGAGGCATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTGATCGAATCTCAGGATACAGATAGGGGTGACCGTCCTAGAAAGAAGGCTACCAGCTGGTCGCTGTAG	765	0.4889	MAASSAITTLRLANIPESRGRVGALNPNTNPKFSGAVGGLGFGFGFGVCSPQPLSVSVGQRKESVLLLPGTGRSRVRASSASEEPSVQSKVTQKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTSENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQDTDRGDRPRKKATSWSL*	255

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr8g2815	254	ProSitePatterns	Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.	140	157	IPR020892	GO:0003755\|GO:0006457
	Apr8g2815	254	ProSiteProfiles	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	106	254	IPR002130	GO:0000413\|GO:0003755
	Apr8g2815	254	SUPERFAMILY	Cyclophilin-like	87	250	IPR029000	-
	Apr8g2815	254	Gene3D	-	79	252	IPR029000	-
	Apr8g2815	254	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	116	131	IPR002130	GO:0000413\|GO:0003755
	Apr8g2815	254	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	145	157	IPR002130	GO:0000413\|GO:0003755
	Apr8g2815	254	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	188	203	IPR002130	GO:0000413\|GO:0003755
	Apr8g2815	254	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	203	215	IPR002130	GO:0000413\|GO:0003755
	Apr8g2815	254	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	216	231	IPR002130	GO:0000413\|GO:0003755
	Apr8g2815	254	CDD	cyclophilin_ABH_like	94	250	-	-

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr8g2815	Apr-Chr8	37452417	37458678	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr8g2815	110	245	U-box Gene Family	AT5G67530	50.365	3.36e-34	127

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr8g2815	K03768		-	gmx:100777088	348.591

Showing 1 to 1 of 1 entries