Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2811 ATGGGGTCGTGCCTCTCGGTGACGAGGGCATCGCCTGTTGTTGGCAGATGTGAGGAATCAGCCACTCCCACAACATCCTCCAAGCATGATTATAGCATGGAAATGCGTTTGCATAGAGTTGCTGGCAGAATCTTCTTGAATGGTTCCTCACAGGTTGCTTCCTTGTTCTGCAAGCAAGGCAGAAAAGGGGTCAACCAGGATGCAATGCTTCTATGGGAGAATTTCTGTAATAAGGAGGGTACCGTTTTTTGTGGTGTCTTTGATGGGCATGGACCTCATGGCCATACGGTTGCAAAGAAAGTGAGGGACTCTTTCCCCTTAAAGCTCATTGCTCAATGGAATTTGCATCCAAACAACAATGCTCATACGTTGGTTGATACAAGTAATTTTGCAAAGCTCAGAGAATCCTTTTTGAAGGCGTGTAAGGTTATGGACAAGGAACTCAAACTACACCATCATATCGATTGCTATTGCAGCGGGACCACCGCCGTTACCTTGCTCAAGCAGGGGCACGACCTGGTCATTGCCAATATCGGGGACTCCAGAGCTGTATTGGGTACACTTGATCTTCAAGGCTCTCTTATTGCCGTTCAATTGACAACTGATCTCAAGCCTAATCTTCCAAGGGAAGCAGAGAGGATCAGAATATGTAAAGGAAGGGTGTTTGCCCTTGAGAACGAACCAAGGATTGCTCGAGTGTGGCTACCCAACGTAGATTCCCCTGGGTTGGCTATGGCACGTGCTTTTGGAGACTTTTGCCTCAAGGATTTTGGAGTCATTTCTGTTCCTGATGTCTCGTATCACCGCCTCACTGAAGAGGATCAATTTGTCGTATTAGCCACAGATGGGGTATGGGATGTTTTATCAAACCAAGAAGTTGTGAGCATTGTGGCATCTACTCCGCGATACTGTGCAGCTCGAATACTGGTGGAGTCAGCTGTTCAAGCATGGAGGACCAAGATGCCCACTTCCAAGGCTGATGATTGCTCTGTAGTTTGCCTCTTTTTTGATTCAGATTCACACCCAAAAAACAACTCGGAGGTAACAAATGAGTGTTCCCGCATTGGCACTAGGGCTGTAGTTGAGCAATCACCACTACTTGAACAAAAGCAGCAATAG 1119 0.4692 MGSCLSVTRASPVVGRCEESATPTTSSKHDYSMEMRLHRVAGRIFLNGSSQVASLFCKQGRKGVNQDAMLLWENFCNKEGTVFCGVFDGHGPHGHTVAKKVRDSFPLKLIAQWNLHPNNNAHTLVDTSNFAKLRESFLKACKVMDKELKLHHHIDCYCSGTTAVTLLKQGHDLVIANIGDSRAVLGTLDLQGSLIAVQLTTDLKPNLPREAERIRICKGRVFALENEPRIARVWLPNVDSPGLAMARAFGDFCLKDFGVISVPDVSYHRLTEEDQFVVLATDGVWDVLSNQEVVSIVASTPRYCAARILVESAVQAWRTKMPTSKADDCSVVCLFFDSDSHPKNNSEVTNECSRIGTRAVVEQSPLLEQKQQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2811 372 ProSiteProfiles PPM-type phosphatase domain profile. 52 336 IPR001932 -
Apr8g2811 372 SMART PP2C_4 43 334 IPR001932 -
Apr8g2811 372 CDD PP2Cc 51 336 IPR001932 -
Apr8g2811 372 Gene3D - 47 338 IPR036457 -
Apr8g2811 372 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 343 - -
Apr8g2811 372 PANTHER ALPHABET, ISOFORM E-RELATED 1 343 - -
Apr8g2811 372 SUPERFAMILY PP2C-like 49 337 IPR036457 -
Apr8g2811 372 Pfam Protein phosphatase 2C 58 300 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2811 Apr-Chr8 37424903 37427233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2811 37 340 PP2C-type Phosphatase Gene Family AT1G16220 58.434 2.64e-140 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2811 - - gmx:100816114 507.679