Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2808 ATGGCGTCCTCCTCTTCTCTGCCGGTGGCCGTCGTTCTTCTCTTCTTCGTGTTCGCAGCTGCCGCCGACGATGCTTCCTGCAATCACGACTTGCAATTGATCAAGGTGAAGAGTTGGGTTGATGGTAAGAAAGATGAAATGTATAACGGTATGACCGCAAAATTTGGCTCTAGTTTGCCTGAGAATGCTGATCAAAGTGTCAGAACTACTGCGGTTTTGCCTAATCCTATAGACTGTTGTTCCTCTTCAACTTCAAAGTTATCTGGATCAGTTGCTGTTTGCGTACGCGGTAATTGTGACTTCACAACTAAAGCTGAATTCGCGCAGTCAGGAGGCGCTACTGCCATGTTGATGATAAACGAGTCAGATGATCTCTTTGAGATGGAGTGCTCCAATGGCACTACGGTAAATATTTCAATTCCAGTTGTGCTGGTAACAAAGTCAACAGGAGAAGCTCTCAACAAATATTTAACGTCTAAGAAAGTGGAAGTTTTGCTATATGCTCCAACTCGACCAATTATAGACTACTCAGTTGCATTTTTGTGGTTGATGGCTGTTGGAACAGTTATATGTGCTTCGCTATGGTCAGATATAACTGCTCCTGATGAATTTAACGAACGCTATAATGAATTGTCTCCCAAGGGATCTTCTAAGGCTGGAACCGGGAAAAATGATTCTGAGAAGGAAATTGTTCACATAGATACAAAGGGTGCTATTGTCTTTGTCATTACGGCCTCTACTTTTCTTGTGTTACTGTTCTTCTTCATGTCATCTTGGTTTATCTGGGTGCTGATTATACTTTTCTGCATTGGTGGTATTGAGGGGATGCACAATTGTATTGTAAGCCTCGCTTTAAGAAAGCGTCCAAGTTATAGTCAGAAGACTGTTAATGTACCTCTGTTTGGGGAGGTTTCCATTTTCTCGCTGGTAGTGTTACTATTCTGTGTGATATTTGCGGTTATATGGGTTGCTACTCGGCATACAACATTTTCATGGTTTGGCCAAGATGTTCTAGGCATATGCTTGATGATAACAGTCTTGCAATTGGCTCAATTGCCTAATATTAAGGTTGCAACTGTACTCCTATGTTGTGCGTTTGTGTACGATATCTTTTGGGTATTCATATCTCCAGTGATATTCCGCAAGAGTGTTATGATTACAGTTGCTCGTGGTGACAAGGCTGGTGGTGAAGCAATTCCCATGCTTTTGAGATTTCCTCGTCCTTCTGATCCTTGGGGTGGCTATGATATGATTGGATTTGGAGATATTCTCTTTCCTGGTTTGCTTGTTTCCTTTGCTCGTAGATTCGACAAAGACAATAAGAAGGGGGTCTTAAGTGGATATTTTCTTTGGTTGGTAATTGGCTATGGCTTTGGCCTCTTCTTCACATATCTAGGCCTTTATATGATGAACGGTCATGGACAACCTGCACTCCTATACCTTGTTCCGTGTACACTAGGAGTCACTGTGGTATTGGGATCCATAAGAGGTGAGCTAAGTAGCCTCTGGAATTATGATGCAGACTCGTCTTCGTCCAAAGAACCTTCTGAAGTTTAA 1557 0.4232 MASSSSLPVAVVLLFFVFAAAADDASCNHDLQLIKVKSWVDGKKDEMYNGMTAKFGSSLPENADQSVRTTAVLPNPIDCCSSSTSKLSGSVAVCVRGNCDFTTKAEFAQSGGATAMLMINESDDLFEMECSNGTTVNISIPVVLVTKSTGEALNKYLTSKKVEVLLYAPTRPIIDYSVAFLWLMAVGTVICASLWSDITAPDEFNERYNELSPKGSSKAGTGKNDSEKEIVHIDTKGAIVFVITASTFLVLLFFFMSSWFIWVLIILFCIGGIEGMHNCIVSLALRKRPSYSQKTVNVPLFGEVSIFSLVVLLFCVIFAVIWVATRHTTFSWFGQDVLGICLMITVLQLAQLPNIKVATVLLCCAFVYDIFWVFISPVIFRKSVMITVARGDKAGGEAIPMLLRFPRPSDPWGGYDMIGFGDILFPGLLVSFARRFDKDNKKGVLSGYFLWLVIGYGFGLFFTYLGLYMMNGHGQPALLYLVPCTLGVTVVLGSIRGELSSLWNYDADSSSSKEPSEV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2808 518 SMART psh_8 229 496 IPR006639 GO:0004190|GO:0016021
Apr8g2808 518 Pfam Signal peptide peptidase 227 507 IPR007369 GO:0004190|GO:0016021
Apr8g2808 518 Gene3D - 31 169 - -
Apr8g2808 518 PANTHER SIGNAL PEPTIDE PEPTIDASE 9 518 IPR007369 GO:0004190|GO:0016021
Apr8g2808 518 Pfam PA domain 80 153 IPR003137 -
Apr8g2808 518 SUPERFAMILY PA domain 86 160 IPR046450 -
Apr8g2808 518 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE PROTEIN 9 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2808 Apr-Chr8 37389464 37395307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2808 40 170 C3H Transcription Factor Family AT1G22670 28.986 4.50e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2808 K09597 - gmx:100782203 832.017