Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2781 ATGCAGGCACATGCTTCTTCTCCTCCCGATTACTTTGGCCACCTGGGAAATAAAACTTACAAAGACGATATATATTTGAGGAAGAGGACGAGAATGCGTCGGTGGCTTTGTTGTACCTGTCAGGTGGAAGAGTCTTACCCATCAAATGAAAATGAACACCTGAAAAGTCCAAGGAATTATGGAGACGGCAATCAAAAAGGCTCAAAGGTGTCGGCTCCTGTCAAGCCCGAAACACAAAAGGCGCCACCACCTATTGAAGTTCCAGCATTATCTTTAGATGAGCTGAAGGAAAAGACTGACAACTTTGGTTCAAAGGCATTAATTGGTGAAGGATCATACGGAAGGGTGTATTTTGCAACCTTAAACAATGGAAAAGCTGTGGCTGTGAAAAAGCTCGATGTTTCATCTGAACCCGAAACAAACAACGAGTTTTTGACCCAGGTTTCCATGGTTTCAAGATTGAAGAATGAAAATTTTGTTGAGTTGCACGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCGTATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTGATTGGATACAACGAGTTAGAATTGCAGTTGACGCAGCAAGGGGATTAGAATATTTACATGAGAAAGTTCAACCACCCATTATACACAGAGATATCAGATCAAGTAATGTGCTCATCTTTGAAGATTACAAGGCTAAGGTAGCTGATTTCAACCTTTCTAATCAAGCCCCTGACATGGCTGCACGCCTTCACTCTACTCGTGTATTGGGAACTTTTGGGTATCATGCTCCAGAATATGCAATGACTGGCCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAACTTCTTACAGGAAGGAAGCCTGTTGATCATACCATGCCTCGAGGACAGCAGAGTCTTGTCACATGGGCTACTCCAAGATTAAGTGAAGATAAAGTGAAACAGTGCGTAGACCCAAAACTGAAGGGAGAATACCCCCCCAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCGCTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTCAAGTCTCCTGCTCCTGCACCAGAAAGTTGA 1182 0.4349 MQAHASSPPDYFGHLGNKTYKDDIYLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPRNYGDGNQKGSKVSAPVKPETQKAPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYFATLNNGKAVAVKKLDVSSEPETNNEFLTQVSMVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKSPAPAPES* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2781 393 ProSiteProfiles Protein kinase domain profile. 102 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2781 393 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 20 392 - -
Apr8g2781 393 MobiDBLite consensus disorder prediction 47 85 - -
Apr8g2781 393 Pfam Protein tyrosine and serine/threonine kinase 107 380 IPR001245 GO:0004672|GO:0006468
Apr8g2781 393 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Apr8g2781 393 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 20 392 - -
Apr8g2781 393 Gene3D Transferase(Phosphotransferase) domain 1 180 389 - -
Apr8g2781 393 SMART tyrkin_6 102 380 IPR020635 GO:0004713|GO:0006468
Apr8g2781 393 SUPERFAMILY Protein kinase-like (PK-like) 82 380 IPR011009 -
Apr8g2781 393 ProSitePatterns Tyrosine protein kinases specific active-site signature. 230 242 IPR008266 GO:0004672|GO:0006468
Apr8g2781 393 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2781 Apr-Chr8 37199753 37204472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2781 36 381 Receptor kinase-like Gene Family AT4G02010 46.705 9.89e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Apr8g2781 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2781 K13436 - gmx:100790016 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2781 8 37199753 37204472 Apr8g2781 8 37199753 37204472 ECH