Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2767 ATGGTATCTGCTACATTTAGGCGAATTGTGTCACCCTGTTGGAGACCATACAATCAAGGTGAATTTTCTAGTAGGCATGGGGATGCAAGTGGACGTGTTGATGGTTTGTTGTGGTATAAAGATTCGGGAAAACACGCCAACGGTGATTTCTCAATGGCAGTTGTTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCAGGCCCCTTGAGCTTTCTTACTGGAAGTCCTCAAGGAACTTTTGTTGGAATATATGATGGGCATGGAGGTCCAGAAGCTTCCCGGTTTGTCAATGAACGCCTATTTAAAAACATCAAGAAATTTACTACAGAAAATAAGGGATTGTCAGCTGATGTTATAAAAAAAGGATTCTTGGAAACAGAAGAAGAATTTCTTTCTGTGGTAGAGAAGCAGTGGCTGCACAAGCCACAGATAGCATCAGTTGGATCATGTTGTTTGATAGGCATAATATGTGGCGGGGAGCTCTATATTGCAAATGCAGGAGATTCTCGTGTGGTGTTAGGTAGACTTGATGAGACTACAAAAGAGATTAAAGCAATTCAACTTTCCTCTGAGCACAATGCTAGCCTTGAATCTGTTAGAGACGAGTTGCGTGCATTGCATCCTCATGATCCGCAGATTGTAGTTATGAAGCACAAGGTCTGGCGTGTGAAGGGTATAATTCAGATTTCAAGATCCATCGGTGATGCATATCTAAAGAAGGCAGAGTTTAATAGAGCACCCTTATTACCAAAATTTCGAATCTCTGAGCCCTTTGATATGCCAATCCTTAAAGCAGAACCAGAAATACTAGTACAGAAGCTGCATCCTCAGGATCGGTTTCTCATATTTGCATCAGATGGATTATGGGAGCACGTGAGCAATCAAGAAGCAGTTGCCATTGTCCAAAACTATCCACGTAATGGAGTGGCAAAGAAACTTGTGAAAACTGCACTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCAGATTTGAAAAAGATTGACCGAGGGGTAAGAAGACATTTCCATGATGACATCACAGTTATTGTTTTGTACCTTGATTCTCACGCAATCATCGGTGCCAATTCACGTGTGCCCATGATTTCAGTCAAAGGAGGTGCTGATTTTGGAATTGGTATTATGAATGCCTAA 1164 0.4124 MVSATFRRIVSPCWRPYNQGEFSSRHGDASGRVDGLLWYKDSGKHANGDFSMAVVQANNLLEDQSQLESGPLSFLTGSPQGTFVGIYDGHGGPEASRFVNERLFKNIKKFTTENKGLSADVIKKGFLETEEEFLSVVEKQWLHKPQIASVGSCCLIGIICGGELYIANAGDSRVVLGRLDETTKEIKAIQLSSEHNASLESVRDELRALHPHDPQIVVMKHKVWRVKGIIQISRSIGDAYLKKAEFNRAPLLPKFRISEPFDMPILKAEPEILVQKLHPQDRFLIFASDGLWEHVSNQEAVAIVQNYPRNGVAKKLVKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDSHAIIGANSRVPMISVKGGADFGIGIMNA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2767 387 Gene3D - 38 364 IPR036457 -
Apr8g2767 387 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 379 - -
Apr8g2767 387 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Apr8g2767 387 SMART PP2C_4 41 355 IPR001932 -
Apr8g2767 387 PANTHER ALPHABET, ISOFORM E-RELATED 8 379 - -
Apr8g2767 387 CDD PP2Cc 50 357 IPR001932 -
Apr8g2767 387 SUPERFAMILY PP2C-like 73 358 IPR036457 -
Apr8g2767 387 Pfam Protein phosphatase 2C 77 327 IPR001932 -
Apr8g2767 387 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2767 Apr-Chr8 37054265 37057994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2767 3 381 PP2C-type Phosphatase Gene Family AT3G12620 72.632 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2767 K01102 - gmx:100785413 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2767 8 37054265 37057994 Apr8g2767 8 37054265 37057994 ECH