Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2749 ATGTCCTCTCGCATTGTTGCAGAGAATGCATTATCGACAACTAATGCCACCACTCCCTATTTCGACTTAATGGAACTCGACCACCTCACGCGCCGCCCCCCCGCCAACGATATGCCCACTCTCGGACAGCTCCTCAAGCACGTCGGAGACGCGCGGAAAGAAGCTGCCGGAGACGGCAGCCAGACGCCGGTGCACCACGCGCTTGACGTCGCTGACTCCGCCGGATTCGACCCGCGCTCCCTGCCATTCGTCCTCTCCTTCACCAACCTCACCTACAGCGTCAAGGTTCGCCGGAAAATGAGCCTCACCTCAATCTTCCAGCGCCGAGGCAGCCGCCTCGGCGCTGCGGCCGTGGCTGAGGCGCCGGCTGTCGGGGAAAGCATGTTCTCGCGGACGAAGACTCTGCTGAACGACATATCCGGCGAGGCGCGCGACGGCGAGATCATGGCGGTGCTCGGAGCCAGCGGTTCCGGGAAGTCAACTCTAATCGATGCGCTGGCAAACCGAATCGCTAAGGGAAGACTGAAAGGCACGGTAGCGCTGAACGGCGAGGCACTGGAGTCGCGTCTTCTGAAGGTGATTTCGGCGTACGTGATGCAAGACGACCTCCTCTTTCCAATGCTCACAGTAGAGGAGACACTGATGTTCGCCGCGGAGTTCAGATTACCTCGCACGCTCTCCAAGTCCAAGAAAAAGGCTCGCGTCCAGGCTCTAATCGACCAGCTAGGTCTCCGCAACGCGGCCAAAACGGTAATCGGCGACGAAGGCCACCGCGGAGTCTCCGGCGGTGAGCGGCGGAGAGTGTCGATCGGCATCGACATAATCCACGACCCTATCCTTCTTTTCCTGGACGAGCCTACCTCCGGACTGGACTCGACGAGCGCGTTCATGGTGGTGAAGGTTCTGCAGAGAATCGCACAGAGCGGAAGCATCGTCATCATGTCCATCCACCAACCGAGCTACCGAATCCTAGGGCTTCTCGACCGCATGATCTTCTTATCGCGCGGCCAGACGGTTTACAGCGGTTCACCGATGCAGTTACCGGTTTACTTCTCGGAGTTCGGTCACCCTATTCCAGATAGCGATAACAGAACGGAGTTCGCGTTGGACCTGATTCGCGAACTCGAAGGCTCCCCCGGAGGAACAAAGAGCTTGGTAGAGTTCAACAAGTCGTGGCAGAGCATGACCAAGCACAATCAAGCAGAAACGATCGACGCTCAACCAAACGGCCTGTCGTTGAAAGAAGCAATAAGCGCAAGCATTTCGAGAGGAAAACTAGTGTCGGGAGCCACCAACACGAACGCGAACCCGTCGTCTATGGTTCCAACGTTCGCGAACCCGTTTTGGATGGAAATGGCGACGCTGTCAAAACGGTCGTTCACAAATTCGAGGAGAATGCCGGAGTTGTTCGGAATCAGGTTGGGCGCGGTGATGGTGACGGGGTTCATTCTGGCAACGATGTTTTGGCAACTGGATAACTCTCCAAAAGGAGTTCAAGAGAGGCTTGGCTTTTTCGCGTTTGCAATGTCAACAACTTTCTACACAACCGCCGACGCGCTTCCCGTGTTCCTCCAAGAACGCTACATTTTCATGAGAGAAACTGCTTACAACGCGTATCGCAGATCATCGTATTTGGTATCCCACGCTCTGGTGGCGTTGCCGTCGTTGGTGTTCCTCTCGCTGGCTTTCGCGGCGACAACATTTTGGGCCGTGGGCCTGGACGGTGGAGTTTCGGGCTTCTTTTTTTATTTCCTGATTATACTGGCCTCCTTCTGGGCCGGGAACTCGTTCGTGACGTTCCTTTCGGGTGTGGTGCCTCACGTGATGTTGGGGTATACGATTGTGGTTGCGATTCTGGCTTATTTCTTGTTGTTCAGTGGGTTTTTCATCAACAGGGATAGAATACCCAGTTACTGGATTTGGTTCCATTACTTGTCGCTCGTCAAGTATCCCTACGAAGCTGTTTTGCAAAACGAGTTCGATGACCCAGTGAAGTGCTTCGTGAGAGGGGTCCAGATTTTCGATAACACGCCTCTTGGGTCGGTGCCTGAGAGCATGAAGTTGAAACTTTTGGATAGCTTGAGCAACACGCTGGGAATGAAGATCACGAGCTCCACGTGTTTGACGACCGGTTCTGATATATTGCAGCAGAATGGGGTCACCGATTTGAGCAAATGGAATTGTTTGTGGATAACAGTGGCTTGGGGCTTCTTCTTCAGGTTTCTATTCTACTTGTCCTTGTTGGTGGGTAGCAAGAACAAGAGGAGGTGA 2271 0.5451 MSSRIVAENALSTTNATTPYFDLMELDHLTRRPPANDMPTLGQLLKHVGDARKEAAGDGSQTPVHHALDVADSAGFDPRSLPFVLSFTNLTYSVKVRRKMSLTSIFQRRGSRLGAAAVAEAPAVGESMFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMQLPVYFSEFGHPIPDSDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKHNQAETIDAQPNGLSLKEAISASISRGKLVSGATNTNANPSSMVPTFANPFWMEMATLSKRSFTNSRRMPELFGIRLGAVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVALPSLVFLSLAFAATTFWAVGLDGGVSGFFFYFLIILASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGSVPESMKLKLLDSLSNTLGMKITSSTCLTTGSDILQQNGVTDLSKWNCLWITVAWGFFFRFLFYLSLLVGSKNKRR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2749 756 Pfam ABC-2 type transporter 453 660 IPR013525 GO:0016020|GO:0140359
Apr8g2749 756 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 119 360 IPR003439 GO:0005524
Apr8g2749 756 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 750 - -
Apr8g2749 756 Pfam ABC transporter 136 288 IPR003439 GO:0005524
Apr8g2749 756 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524
Apr8g2749 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 347 IPR027417 -
Apr8g2749 756 PANTHER ABC TRANSPORTER G FAMILY MEMBER 6-LIKE 14 750 - -
Apr8g2749 756 Pfam ABC-2 type transporter 317 395 IPR043926 GO:0140359
Apr8g2749 756 Gene3D - 126 350 IPR027417 -
Apr8g2749 756 SMART AAA_5 145 337 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2749 Apr-Chr8 36926183 36928682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2749 135 320 Calmodulin-binding Proteins AT2G36910 30.159 3.13e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2749 K05681 - gmx:100803658 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2749 8 36926183 36928682 Apr8g2749 8 36926183 36928682 ECH