Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2742 ATGATCTCAAACGTGGACCCTGCAGAACCAGCCACCGCGGCCGCCACCGCGGCCGTCGCAACAGCCTCCGCCGCTTCTTCCCATGAAGATCACTCCGCACCGCCGCCATCTCCTAACATTCTGATGTCCTCAAAGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGTTTTCTCTCTGGAAGTCGAAATGGGAGGTTCAGCTATGGATATTCCAGCTTCAAGGGTAAAAGGTCATCAATGGAGGATTTCTTTGAGACAAGAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTCGGTGTTTTTGATGGTCATGGAGGTTCCAGGACTGCAGAATACCTGAAAAATAATTTGTTTAAGAATTTGAGTAGCCACCCTGACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAACGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGGGACCGAATTCTTGTTGCAAACGTTGGTGATTCCAGAGTAGTTGCAAGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATTGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAACAGGCTGGGGGATTCATAATTTGGGCTGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGAGCATTTGGAGACAAACTTCTCAAGCCATATGTTGTTGCTGACCCAGAAATTAAGGAGGAAGCAATTGATGGTGTAGATTTTATTATAATCGCAAGTGATGGCCTTTGGAATGTCATATCAAATAAGGAGGCCGTGTCTTTAGTACAAAATATCACTGATGCAGAAATGGCATCCAGAGAACTTATTAAAGAGGCTTATGCACGAGGAAGCTCAGACAACATCACTTGTGTAGTTGTTCGATTTGATCTATCCTGA 951 0.4511 MISNVDPAEPATAAATAAVATASAASSHEDHSAPPPSPNILMSSKDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRILVANVGDSRVVASRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIKEEAIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEMASRELIKEAYARGSSDNITCVVVRFDLS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2742 316 SMART PP2C_4 57 311 IPR001932 -
Apr8g2742 316 MobiDBLite consensus disorder prediction 22 44 - -
Apr8g2742 316 CDD PP2Cc 67 313 IPR001932 -
Apr8g2742 316 PANTHER ALPHABET, ISOFORM E-RELATED 34 316 - -
Apr8g2742 316 Gene3D - 61 315 IPR036457 -
Apr8g2742 316 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Apr8g2742 316 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 34 316 - -
Apr8g2742 316 SUPERFAMILY PP2C-like 61 314 IPR036457 -
Apr8g2742 316 Pfam Protein phosphatase 2C 69 306 IPR001932 -
Apr8g2742 316 ProSiteProfiles PPM-type phosphatase domain profile. 68 313 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2742 Apr-Chr8 36875296 36880469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2742 40 316 PP2C-type Phosphatase Gene Family AT1G43900 74.729 1.23e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2742 K17506 - gmx:100776867 535.413