Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2730 ATGATGGTATCCAGGGGACTGTTCGGGTGGTCCCCACCTCACATACAGCCTCTCACGCCAGTCTCCGAGGTGTCCGAGCCGCCCGAGTCGCCGTCGCCGTATCTTGACCTCGGCGCCGAGACCTCCGCGTCGCAGCAGGTGGAGGTCGAGGAGGAGATTGAGGAGGCCGAGGAGATTGAGCCGCCGCCAGCCGCCGTTCCTTTCTCTCGCCTCTTTGCCTGCGCCGACCGACTCGACTGGTTTCTCATGGTAGTTGGCTCCGTCGCCGCCGCCGCTCATGGCACCGCTCTCGTCGTTTATTTGCACTACTTTGCTAAGGTTCTTCGGGTTCCTCAGCAGCAAGGTTCGCCGGAGGAGTTGTTTCACAGGTTCAAAGAGCTTGCTTTAACCATTGTTTATATTGCCGGGGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCGTGTTGGATTCTTACTGGAGAGCGGCAGACTGCTGTCATCAGATCAAAATATGTTCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACTTACGGGAATAATGGAGACATTGTGAGTCAAGTGTTGAGTGATGTGCTGCTCATTCAGTCTGCTCTAAGTGAAAAGGTTGGGAATTATATTCATAATATGGCAACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCGTTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTCCACAGGCTTGCTGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATAAGGACCTTGTATGCATTTACTAATGAAACATTGGCTAAATATTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTGATAAGTCTTGTTCAAGGGCTTGGCCTTGGATTTACATATGGGCTGGCGATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATACATAGAAAAGCTCATGGTGGTGAAATTATAACCGCTCTGTTTGCTGTGATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTATTTGAGATGATAAGCCGATCATCCTCATCTTTTAATCACGATGGCAGTGCTCCAGCTTCAGTGCAAGGAAATATAGAGTTTCGAAATGTTTATTTTAGTTATCTTTCTCGCCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTCGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCCCTCATGGAGCGGTTCTATGATCCAACATTAGGAGAAGTTCTATTAGATGGAGAAAACATAAAAAATTTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCCTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGAGAGATACTTCCATGGATCAAATTGAAGAAGCTGCTAAAATAGCTCATGCACACACTTTTATCAGCTCATTAGGCAAAGGTTATGACACACAGGTTGGAAGGGCTGGTATAGCTTTGACAGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTTACTGGTGGGCTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTGATGTTGGGACGTTCTACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTACATAGCAGTTATGGAGGATGGGCAACTTGTTGAAATGGGTACTCATGATGAGTTGCTGACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCCACAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAAGATTCATCAGAAAATCATAGCTTCAAAGAACCTTCATCTCCTAGAATGATTAAGTCACCCTCTCTTCAAAGAGTTTCTGCCGTATTTCGGCCTTCAGATGGCTTCTTTAACTCACAAGAATCACCAAAAGTTCGGAGCCCACCATCTGAGAAGATGATGGAAAATGGTCAGTCTCTAGATTCATCAGATAAGGAACCATCAATTAAAAGGCAGGATAGTTTTGAAATGAGACTACCAGAGTTGCCCAAGATTGATGTTCAGTCTGTGCATCGGCAAACATCAAATGGTTCTGATCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGCAGACCTGATAGTCATTCTGACGATTTTTCTGTGAAAATGAATGAAACAAAGGATACAAAGCATCGAGAACAACCCTCACTTTGGAGGCTGGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCAGTGTTAGGAAGCGTAGGTGCTGCTATCTTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGCCTGGTGGTGACAGCTTACTATAGAATTGATGAAGGTCATCACTTGCTAAGGGAGATAGACAAATGGTGCTTGATCATTGCCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATCATGGGGGAGAAAATGACCGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAATTGGATGGTTCGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTGCGAGCTGCTTTCAGTAATCGACTTTCCATATTTATACAGGATAGTGCTGCAGTTATTGTTGCTTTTGTGATTGGTGTTTTGCTGCACTGGCGATTAGCACTAGTGGCTTTAGCAACACTTCCGGTTCTCTGTGTTTCTGCGGTTGCCCAGAAATTGTGGCTTGCTGGATTTTCGCGGGGCATACAGGAGATGCATAGAAAGGCATCTTTGGTTCTTGAAGATGCGGTTAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTGTACCGATTGCAGTTAAATAAAATATTCAAGCAGAGCTTTCTTCATGGAGTGGCCATTGGTTTTGGGTTTGGCTTGTCGCAGTTTCTACTTTTTGCTTGTAATGCTTTTCTACTTTGGTACACTGCAATATGTATAAAAAGAAGCTATGTAGATCCACCCACTGCGCTCAAGGAATACATGGTTTTCTCATTTGCTACATTTGCCCTTGTGGAACCTTTTGGATTGGCTCCTTACATACTCAAGCGGCGTAAATCTCTCATTTCAGTGTTTGAAATTATAGATCGTGTACCCAAAATTGATCCTGATGATAATTCAGCACTAAAGCCACCTAATGTATACGGAAGCATTGAGTTGAAAAATGTTGACTTTTGTTATCCTTCTCGACCAGAAGTATTGGTATTAAGTAATTTTAGTCTCAAAGTCAATGGAGGACAAACAATCGCTGTAGTGGGAGTTTCAGGGTCAGGAAAGAGCACAATAATATCATTGATCCAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTGCTAGATGGGAGGGATTTAAAACTATATAATTTGAGATGGTTGAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCCAGACATAATGCCAGTGAAGCTGAAATGAAAGAAGCTGCAAGAATAGCAAATGCTCATCATTTCATTAGTAGCTTGCCTCATGGGTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAAAAACAGAGAATTGCAATTGCGAGGGTTGTGCTTAAAAATGCACCTATTTTGTTGTTGGATGAAGCCAGTTCATCAATTGAATCTGAGTCAAGCCGTGTGGTGCAGGAGGCTCTAGACACCCTAATAATGGGGAACAAGACCACTATTTTAATAGCGCACAGAGCTGCAATGATGAGGCATGTGGACAACATAGTAGTTCTTAATGGCGGACGGATAGTGGAGGAGGGGACACATGATTCATTGGTGGCAAGAAATGGTCTGTATGTTCGATTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAA 4203 0.4292 MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSASQQVEVEEEIEEAEEIEPPPAAVPFSRLFACADRLDWFLMVVGSVAAAAHGTALVVYLHYFAKVLRVPQQQGSPEELFHRFKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHRKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTSMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGIALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPVRNYKETAAFQIEKDSSENHSFKEPSSPRMIKSPSLQRVSAVFRPSDGFFNSQESPKVRSPPSEKMMENGQSLDSSDKEPSIKRQDSFEMRLPELPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSHSDDFSVKMNETKDTKHREQPSLWRLAELSFAEWLYAVLGSVGAAIFGSFNPLLAYVIGLVVTAYYRIDEGHHLLREIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEIGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFVIGVLLHWRLALVALATLPVLCVSAVAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFKQSFLHGVAIGFGFGLSQFLLFACNAFLLWYTAICIKRSYVDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIQRFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVARNGLYVRLMQPHFGKALRQHRLV* 1401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2730 1400 Coils Coil 250 270 - -
Apr8g2730 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 371 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2730 1400 Gene3D ABC transporter type 1, transmembrane domain 61 385 IPR036640 GO:0005524|GO:0016021
Apr8g2730 1400 SUPERFAMILY ABC transporter transmembrane region 63 379 IPR036640 GO:0005524|GO:0016021
Apr8g2730 1400 SUPERFAMILY ABC transporter transmembrane region 814 1136 IPR036640 GO:0005524|GO:0016021
Apr8g2730 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 638 IPR027417 -
Apr8g2730 1400 Gene3D - 394 647 IPR027417 -
Apr8g2730 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 404 639 IPR003439 GO:0005524
Apr8g2730 1400 MobiDBLite consensus disorder prediction 751 779 - -
Apr8g2730 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 828 1120 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2730 1400 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 379 - -
Apr8g2730 1400 Gene3D - 1173 1394 IPR027417 -
Apr8g2730 1400 MobiDBLite consensus disorder prediction 696 726 - -
Apr8g2730 1400 CDD ABC_6TM_Pgp_ABCB1_D2_like 823 1134 - -
Apr8g2730 1400 MobiDBLite consensus disorder prediction 780 807 - -
Apr8g2730 1400 MobiDBLite consensus disorder prediction 18 37 - -
Apr8g2730 1400 Pfam ABC transporter transmembrane region 85 354 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2730 1400 Pfam ABC transporter transmembrane region 833 1095 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2730 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1151 1388 IPR003439 GO:0005524
Apr8g2730 1400 SMART AAA_5 431 610 IPR003593 -
Apr8g2730 1400 SMART AAA_5 1178 1365 IPR003593 -
Apr8g2730 1400 MobiDBLite consensus disorder prediction 727 743 - -
Apr8g2730 1400 MobiDBLite consensus disorder prediction 662 807 - -
Apr8g2730 1400 Gene3D ABC transporter type 1, transmembrane domain 797 1160 IPR036640 GO:0005524|GO:0016021
Apr8g2730 1400 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1396 - -
Apr8g2730 1400 Coils Coil 39 59 - -
Apr8g2730 1400 PANTHER ABC TRANSPORTER B FAMILY 19 1396 - -
Apr8g2730 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1140 1387 IPR027417 -
Apr8g2730 1400 Pfam ABC transporter 1169 1317 IPR003439 GO:0005524
Apr8g2730 1400 Pfam ABC transporter 425 569 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2730 Apr-Chr8 36799519 36810620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2730 59 697 Calmodulin-binding Proteins AT2G36910 43.692 8.30e-164 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2730 K05658 - gmx:100799399 2566.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2730 8 36799519 36810620 Apr8g2730 8 36799519 36810620 ECH