Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2719 ATGGTGAACCTGATGGAATGGCAGAAACAGCTGCAGAGTGGGAATGAGAATGAGAATGGGAATGGGAATGGGAATGTTGATGCCAATGGACAACTCATGTATGTGAAGGTTATGACTGATGAACAGTTGGAAACCCTGAGGAAACAAATTGCAGTTTATGCCACCATTTGTGACCAACTTATTGAGATGCATAGAACTCTCTCAGCTCAGCAGGATCTGGCAGGGGTTAGATTGGGTAACATATACTGTGACCCATTGATGACATCTGGTGGCCACAAAATAACATCTAGACAGAGGTGGACACCCACACCTGTGCAGCTTCAGATTCTTGAACGAATATTTGATCAGGGAAATGGAACTCCAAACAAGGAAAAAATCAAGGAAATCACCACTGAACTGGGCCAACATGGCCAAATTTCTCAAACCAATGTCTATAATTGGTTCCAGAATAGGCGTGCTAGATCCAAGAGAAAATTGCAAAATGTGACTCCTAGCAACACTGAATCAGAACTAGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAACCAGAAGATATTCAATCCCAACATAACATAACAACTACAGGGTCTGAAAAGTTGTGCTTCCAAGATCCTCAAGTATGCTCTGACTTGCAGTACTTGAACCCAAATTCTAACAAAACATGTTCCATGTTCCCATCAGATGCCACTGTGAAATCCACAAGAAATCTGGGTCGTATGTCTGTCTTTGATGAGGTGCTATCAAACTCAAGGAATGATTATCTGGTTGGGAAAATGGAAGTAGCTGCAACTGGGAGTTACAATTTATATCATCACCAAGCAGGAGACTACAATCTGGCAGGTTGA 849 0.4193 MVNLMEWQKQLQSGNENENGNGNGNVDANGQLMYVKVMTDEQLETLRKQIAVYATICDQLIEMHRTLSAQQDLAGVRLGNIYCDPLMTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPNKEKIKEITTELGQHGQISQTNVYNWFQNRRARSKRKLQNVTPSNTESELDTEVDSKDKKTKPEDIQSQHNITTTGSEKLCFQDPQVCSDLQYLNPNSNKTCSMFPSDATVKSTRNLGRMSVFDEVLSNSRNDYLVGKMEVAATGSYNLYHHQAGDYNLAG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2719 282 SMART HOX_1 95 162 IPR001356 GO:0003677
Apr8g2719 282 Gene3D - 99 163 - -
Apr8g2719 282 Pfam Homeodomain 97 157 IPR001356 GO:0003677
Apr8g2719 282 ProSiteProfiles 'Homeobox' domain profile. 93 158 IPR001356 GO:0003677
Apr8g2719 282 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 281 IPR044559 GO:0003700
Apr8g2719 282 SUPERFAMILY Homeodomain-like 95 159 IPR009057 -
Apr8g2719 282 MobiDBLite consensus disorder prediction 155 188 - -
Apr8g2719 282 CDD homeodomain 97 158 IPR001356 GO:0003677
Apr8g2719 282 MobiDBLite consensus disorder prediction 171 187 - -
Apr8g2719 282 PANTHER - 3 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2719 Apr-Chr8 36749678 36751865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2719 4 282 Wox Gene Family AT4G35550 51.155 1.19e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr8g2719 Homeodomain 7.8e-18 CL0123