Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2684 ATGTCGAGCTCCGACGGAACCGCCAACGCCGTCAGTAACGGCTCCATAATTGACACCCAGCGTCAGGGACCTCAGCAGTTAGCCGTCAAGAAACCGCCGTCCAAGGACCGTCACAGCAAAGTCGACGGTCGAGGACGTCGCATACGCATGCCAATCATATGCGCCGCACGTGTGTTCCAGCTCACGCGCGAGCTGGGTCACAAGTCCGACGGTCAAACCATAGAGTGGCTACTCCGCCAAGCCGAACCGTCCATCATCGCCGCCACCGGCACAGGCACCACCCCCGCCAGCTTCTCCTCCGTATCACTCTCCGTCCGCTCCTCCCCTTCCTCCACCTCCGACCACAAACCCCCCTTGCTCGCTCCCACTCCCTTCATCCTCGGCAAGCGCATACGCACCGATGATGACTCCTCCGCTTCCGCCAAAGACGATGCTCTCTCCGTGGGCCCTTCTCTCGTCGGCCCTACTACCCCCTCTGCCCTGTGGGCCCTCCCGGCCCGGCCTGATTTCGGACAAATTTGGAGCTTCGCTGCTGCTGCTGCCGCTGCGGCTCCTCCTCCCGAAATGATTGTGCAGCCCGCGGCGGTGTCGGTGGCGCAGCAGCAGCAACAGGTTTCTCTTTTCGCTCATCACCACCATCATCAGCAGCAACAACAGGCCATGGGAGAAGCTTCGGCGGCGAGGGTGGGGAATTACCTTCCCGGCCATCTGAATTTGCTCGCTTCTTTGTCGGGAGGGCATGGGAATTCTAGTCGGAGAGACGACGAGCCTCGTTGA 777 0.6152 MSSSDGTANAVSNGSIIDTQRQGPQQLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSLSVRSSPSSTSDHKPPLLAPTPFILGKRIRTDDDSSASAKDDALSVGPSLVGPTTPSALWALPARPDFGQIWSFAAAAAAAAPPPEMIVQPAAVSVAQQQQQVSLFAHHHHHQQQQQAMGEASAARVGNYLPGHLNLLASLSGGHGNSSRRDDEPR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2684 258 ProSiteProfiles TCP domain profile. 34 88 IPR017887 -
Apr8g2684 258 MobiDBLite consensus disorder prediction 1 47 - -
Apr8g2684 258 MobiDBLite consensus disorder prediction 89 123 - -
Apr8g2684 258 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 255 IPR005333 GO:0003700
Apr8g2684 258 Pfam TCP family transcription factor 34 192 IPR017887 -
Apr8g2684 258 MobiDBLite consensus disorder prediction 1 27 - -
Apr8g2684 258 MobiDBLite consensus disorder prediction 31 47 - -
Apr8g2684 258 MobiDBLite consensus disorder prediction 89 117 - -
Apr8g2684 258 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2684 Apr-Chr8 36536687 36539765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2684 12 258 TCP Transcription Factor Family AT5G23280 65.600 6.69e-98 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr8g2684 TCP 3.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2684 K16221 - gmx:100799005 352.829