Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2672 ATGCATTGCCATGAATTGTGCAAACAAGTTTCAATCATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACATGTCCATCGTAACATATAGGCAGACAATTTCATTTATCTTCATGGCACCTATTGCTTGCTTCTATGATAGGAAACACAAACTGAGGGTTCACATAATATGTCTCCTTTTCCTCAGTGCTCTTCTAGGAATAACACTCCCCCAATACCTATTTCTTATTGGACTTGAATATACGTCTGCTACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCTGTGCCATTTGGGATCGAGAAGGTGAACGTGCAAAGCAAGAGTGGTAAGGCCAAAGTCTTAGGAACTACTGTATGCATTGGTGGAGCTGTGTTGTTGGTCCTTTATAAAGGAATGCCCCTTATCGACCCACATTCTCAACACATAGCAGACGAAGTTACAAGCCCAACTCCATCTGCCAAGTTAGAGAAATGGATTATAGGGTCAATAATTCTGACTATAGGCTGCCTCTTGTGGTCTTCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCGTGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCCATTCAATCAGCAATATTGACTTTGATCATCAAGAGAAATAATGCCTCGTGGATTCTGAAAGGAAAGCTTGAAATAATGTGTGTTATATATACTGGCTTGGTTGGATCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACCGCAGCTTTTACCCCCCTTTTACAGATATTTGTGGCTATCCTCGATTTCTCTTTACTAAAGGAGGAAATTTACCTGGGAAGTGTTGCAGGATCTTCCTTGGTTATTGCCGGTATGTATATTCTTCTGTGGGGAAAAGGTAAAGAGGGAGAGCAGTATGTCCTGAAGGATACGCAACCAAATGAAGATGTTGACTTTCCATAG 1032 0.407 MHCHELCKQVSIMILVNLALAFVNLLLKKVLNEGMDYMSIVTYRQTISFIFMAPIACFYDRKHKLRVHIICLLFLSALLGITLPQYLFLIGLEYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNVQSKSGKAKVLGTTVCIGGAVLLVLYKGMPLIDPHSQHIADEVTSPTPSAKLEKWIIGSIILTIGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAILTLIIKRNNASWILKGKLEIMCVIYTGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIFVAILDFSLLKEEIYLGSVAGSSLVIAGMYILLWGKGKEGEQYVLKDTQPNEDVDFP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2672 343 Pfam EamA-like transporter family 12 148 IPR000620 GO:0016020|GO:0016021
Apr8g2672 343 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Apr8g2672 343 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016021|GO:0022857
Apr8g2672 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 324 - -
Apr8g2672 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Apr8g2672 343 PANTHER WAT1-RELATED PROTEIN 9 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2672 Apr-Chr8 36475332 36477048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2672 5 253 Nodulin-like Gene Family AT3G30340 48.207 2.96e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2672 - - aprc:113871928 676.781