Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2670 ATGAGGAATCCACAGGTTGAAGCCCACAGATTTGAATTATCCTCACACTTGTTCGTAGTTCCCTTCAGACACATCGATTTTTGTACTCACCGAATCTTCGCCCTATCACATTCACATTCACATTCACATTCAGCTTTATCCGGAATTTCCATGGCGCGTGGAAGGAAGAAGCCGCAAAGGAACAACACAGCCACAGTGGACCCTGTTTCTGTCGACACTCATCAAGAAACACAATCTTTCGATTTTCATGCTCAGGGTGAGGTGCCCAGAGACACCATTTTGGAGGAAAAGGTCGATGGAGAAGCTCAAGTGATCAACTTGGCTGAAAATAATGACCATGATGGGGCAAAAGGTTCTTCTTCAGTTCAAGAGGTCGTGAAAAAGAAGCGCGGGAGGAAGAGTAAAAAGGATAAGGCCATGGAGCAGAAGGGAAAGTTGGAAGAAGAAAACGGGGTTGTGAAGAGGGAACAAGAGGGTAATGAAGACGATAATGGTGGGGTTTTGGAGGAGAGACCTTGCAGGAAAAGAAAGATTCTCAAGGTAGATGATGGCGAGTTTAAAATGGCTTTGGATTATTCAGGAAGTGGCATTCGGAGAGAATATGGTCTTAGAGGCCGTAAAGTTGTTAGAGAGGAGAAACCAAAACTCCACACGCGGGATCCTAAGCGGATTCAAGATAAGTCCTCAATGTGCCATCAATGTCAGAGAAATGATAAAGGCGATGTTGTGAGGTGCACAAGTTGTAAACGCAAAAGATATTGTCTTTTTTGTTTAAAGGCCTGGTATCCTCATTTGGAACCAGATGACATTGCTAAGGCATGTCCTGTGTGCTGCGGAAATTGCAATTGCAAAGCATGCTTGAGATCTGATGAACTTATCAACGAAATGAAGGAAAAGGCAAAAACCAATAAAGATGAGAAGGTTGAACTCTCCCTGTCCTTGCTGCAAACACTTCTTCCATATTTAAGGCAGTTGGATGAAGAACAGATTATTGAGAAGGAGATAGAAGCTAAGATACAAGGGCTCTCACTCTCAGAGCTAAATATAGTAAAGGCAGATTACTCTGACAAGGAGCGTTCGTACTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGCCCTTTTGACCTTTGTCTCATCTGTTGCGGTGAGCTTCGTAGTGGGCAGCTTCTAGGTGGTGCAGATCCAATTGAGTTGGAATTTGTCTGGCGAGGTCGTGAATACTTGCATGGTGAAAAAGAAAATAAAAATCAAAAACAAATTGCATCAAATGCTGGTGCTAAGCCTGGGGTTCGCGAATGGTCAAGATCTGGTTGGCATGCAGAAAGCAATGGTAGCATTCCTTGTCCAAAAGCCAATGATGAATGTGACCATGGTTTTCTTGAACTGAGAAGCATATTAGGTCAAGATTATATTGCCGAGTTAGTATGTAAAGCAGAAGAACTTGTACAAGCATACAAGCTTCAAGAAGCAGTCCAATCCTCTGACATCTACTGTTCATGTTTGAAGCTTGATAGAAACACAAATGTTAAATGTGATAATATGAGGAAGGCTGCTTTTCGTGGAGATTCCACTGACAACTATTTATACTGTCCTAGGGCTGTAGATTTACAGCATGAAGATTTAAGACATTTTCAATGGCATTGGAAAAGAGGGGAGCCTGTCATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCACTGGTCATGTGGCGTGCATTCCGTCAGATAACTAAGACCAAACATGATCAACATTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGAGAGATTAATATCCACCAATTTTTTACTGGGTATACAAGTGGTCGTAAGGATTGGCTTGATTGGCCTCAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATCTATTTGAGGAACGCTTACCTCGACATTGTGCTGAGTTCATATCCTCCTTGCCCTACAAGGAATATACGGATCCTCTCAATGGTGCTCTTAACCTTACTGTGAAGTTGCCAGACACTTACCTAAAGCCAGACATGGGGCCAAAGACGTATATTGCTTATGGATTTCCACAGGAGTTTGGGCGTGGGGATTCTGTGACTAAGCTCCATTGTGACATGTCTGATGCAGTAAATGTTTTGACTCATATTGCTGAAGTGAAGTTGGAGTCTGAGCAAATTACTGCCATTGAAAAGTTGAAACAAAAGCACTTTGAGCAAGACCAACATGAGCTACTTAGAGGTGATCACAATGGAGAAACTAATGTTGAGATGCTTAATAATTCATCTCCTACCATAAATGCTTTGGACAAGCAAGATAATGTTCAAGTTACAGAACATAAAAGTGGATATTGGGATGTGAAATTAGTTGATCGGTTTCATCAACCCTCTGAGAGTAGTAATAATGCATTTTCAACCATAAATACTGTTGCTAATGCGGATGGTCTTTCATGTGGGTCAAAGCTCAAAGAGGTTGACGAAGTGAATATAAAACAAGAAAATTTGTTGGTTGGGAGGGATGTTTCAGAAGGTGCTCTCTGGGATATTTTTCGGAGACAGGATGTACCTAAATTGCAAGAATATCTGAAGAAGCATTTCAGAGAGTTTAGGCATGTCCATTGCTGTCCTTTAAAACAGGTTATTCATCCCATCCATGACCAGACCTTCTATCTGACTATGGAGCATAAGAGGAAGCTTAAAAAGGAGTATGGAATTGAGCCTTGGACTTTCATTCAAAAGCTTGGGGATGCTGTTTTTATTCCAGCGGGTTGTCCTCACCAGGTCAGAAATCTGAAGTCATGCATTAAGGTTGCATTGGATTTTGTCTCTCCTGAAAATATTGGTGAGTGCTTCCATTTGACTGAGGAGTTTCGCACACTTCCAATAAATCACAAGTCTATTGAGGACAAACTTGAGGTGAAGAAAATGACAGTATATGCCATGCAAGATGTGATCAGAAAATTGGAGACAGCAAGGTCTGGGGAAACTAAGGTTCCTGAGTAA 3027 0.4156 MRNPQVEAHRFELSSHLFVVPFRHIDFCTHRIFALSHSHSHSHSALSGISMARGRKKPQRNNTATVDPVSVDTHQETQSFDFHAQGEVPRDTILEEKVDGEAQVINLAENNDHDGAKGSSSVQEVVKKKRGRKSKKDKAMEQKGKLEEENGVVKREQEGNEDDNGGVLEERPCRKRKILKVDDGEFKMALDYSGSGIRREYGLRGRKVVREEKPKLHTRDPKRIQDKSSMCHQCQRNDKGDVVRCTSCKRKRYCLFCLKAWYPHLEPDDIAKACPVCCGNCNCKACLRSDELINEMKEKAKTNKDEKVELSLSLLQTLLPYLRQLDEEQIIEKEIEAKIQGLSLSELNIVKADYSDKERSYCDNCKTSIFDYHRSCTKCPFDLCLICCGELRSGQLLGGADPIELEFVWRGREYLHGEKENKNQKQIASNAGAKPGVREWSRSGWHAESNGSIPCPKANDECDHGFLELRSILGQDYIAELVCKAEELVQAYKLQEAVQSSDIYCSCLKLDRNTNVKCDNMRKAAFRGDSTDNYLYCPRAVDLQHEDLRHFQWHWKRGEPVIVSNVLECTSGLSWEPLVMWRAFRQITKTKHDQHLDVKAIDCLDWCEGEINIHQFFTGYTSGRKDWLDWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTDPLNGALNLTVKLPDTYLKPDMGPKTYIAYGFPQEFGRGDSVTKLHCDMSDAVNVLTHIAEVKLESEQITAIEKLKQKHFEQDQHELLRGDHNGETNVEMLNNSSPTINALDKQDNVQVTEHKSGYWDVKLVDRFHQPSESSNNAFSTINTVANADGLSCGSKLKEVDEVNIKQENLLVGRDVSEGALWDIFRRQDVPKLQEYLKKHFREFRHVHCCPLKQVIHPIHDQTFYLTMEHKRKLKKEYGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENIGECFHLTEEFRTLPINHKSIEDKLEVKKMTVYAMQDVIRKLETARSGETKVPE* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2670 1008 SMART cupin_9 649 966 IPR003347 -
Apr8g2670 1008 PANTHER - 101 993 - -
Apr8g2670 1008 SUPERFAMILY Clavaminate synthase-like 541 979 - -
Apr8g2670 1008 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 101 993 IPR045109 GO:0032454|GO:0033169
Apr8g2670 1008 Gene3D Cupin 537 975 - -
Apr8g2670 1008 Coils Coil 136 156 - -
Apr8g2670 1008 MobiDBLite consensus disorder prediction 109 169 - -
Apr8g2670 1008 MobiDBLite consensus disorder prediction 137 169 - -
Apr8g2670 1008 ProSiteProfiles JmjC domain profile. 668 966 IPR003347 -
Apr8g2670 1008 Pfam JmjC domain, hydroxylase 853 949 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2670 Apr-Chr8 36452339 36468541 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Apr8g2670 JmjC 1.7e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2670 K15601 - gmx:100805723 1340.1