Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2664 ATGCAAACTATCAGGAAATCTTTCAAATCGTATGGTTCATACAACAAACGTTCTGGAAGGTTTCCCAGCACCGGAAACCCCGATTCCGACCCCGAGCAGCTCCCTATTCTCCTCGACCAAGAAAACCACCGTCACACCCATTCTTTTCCGATGGCCGGAGATTGCGTCGTTAAGATCGACGACGCCGACCCTTCTCAGACAAACAAGATTTGGAGGGAGTCCAGCTATGATTTCTGGCAGGAAGAAGGCAATGCTCACGAAGAGAGCTTCGATTTTCGCCAAAAGGGTCAGGCGGAGGACCCGCCGTCGCAGCTGATCGGAAGGTTTCTCCACAAGCAGAAGGTCTCCGGCGGAGAGATGTCGCTGGACATGGATTTGGAGATGGAGGAGCTTCAGAACGACGGCAGCGGCAAGTTGACGCCGGTGGAGGAGTCTCCGATGACCCACCAAGAAGGCACAGCAAGGACTCGCCGTCGCTCTCGGACGGGTAACGGCGGTGACGGCGAGGTGGTGAGGTGCACCTCCAACGCTTCCTTTGAGAGGAACCTCTCGATGCAGAGGAAGTCCGCGTTGTTGAAGGTGAAAACCAGGTCCAGATTAATGGACCCGCCAGAAGAACCCGATAAGAAATCGAGTCGGGTTTTGAAATCGGGGCAACTCCTTTCCGGGTTTCTGGGGAAGAAGGGTGACGACGAGGAGGAAGATCCGTTTTTGGAAGAGGATCTTCCCGATGAGTTTAAAGAGAACCATTTTAGCTTCTGGATTCTTCTTGAGTGGTTGAGTTTGATTTTGATCATTGGTGTGTTGATTACAACGCTTAGTATTCCGTATTTGAGGAACAAGAATCTTTGGAACCTCAAGTTGTGGAAATGGGAGGTGATGGTTCTTGTTTTAATATGTGGCAGGTTGGTTTCTGATTGGGTTATTAGGATTGCCGTGTTCTGCATTGAGAGGAATTTCCTCTTGAGGAAGAGGGTGCTCTATTTTGTGTATGGTGTGAAGAAGGCTGTTCAGAATTGCATGTGGTTGGGGCTTGTTTTGATTGCATGGCATTTGTTGTTTGATAAGAGGGTCCAGAGGGAGACCAACAGTAATTTCCTTGAGTATGTTACTAAGGTGTTGGTATGTTTCTTGGTGGGAACTCTGGTTTGGTTGGTGAAAACTCTTGTGGTTAAGGTCCTGGCTTCTTCTTTCCATGTGAGCACCTACTTTGATAGGATTCAAGAGTCACTTTTTAATCAGTTTGTGATTGAAACACTTTCTGGGCCTCCTTTGGTGGAGCTGCAAAAGGCTGAAGAGGAGGAGGAAAGGCTTGCTGACGAGGTTCAGAAGCTGCAGAATGCTGGGAGTGGGAGGTTGAAGAGTGGAGCGCTCCAGAAAAGCCCCAGAATTAAGAGTGGCAAGTTTTCAAGGCCACTTTCTAAGAAGTCTGATGATGGCAATGGGATAACTATTGATCACTTGCATAAGCTCAATCCCAACAATGTCTCTGCATGGAATATGAAAAGGTTAATGAATATGGTCAGGCATGGTGCTCTTTCTACATTGGATGAACATATACTTGATAGCCCTCATGATGATGAGAATGCCACGCAAATTCGAAGTGAAAACGAGGCTAAAGCAGCTGCAAAGAAAATATTTCAGAATGTTGCTAGGCGCGGATGCAGGTACATATACCCGGAGGACTTGATGCGTTTTATGCGAGAAGATGAAGCTGCAAAAACCATGAATCTCTTTGAAGGAGCCACCGATACTGGGAGAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAAAGAAGAGCACTTGCTTTGACATTGAATGACACCAAAACGGCAGTGAACAAACTTCACCGAATGCTGAATTTTGTAGTTGCAATTATTATACTGGTTATTTGGCTCTTGATATTGGAAATTGCCACCACCAAATTCCTCCTCTTCGTGAGCTCACAACTTGTCTTGGTTGCATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATTGATGGCGTTCAGATGGTTGTGGAAGAAATGAACATATTGACTACCATATTTCTGAGATATGATAATCAAAAGGTTATCATCCCGAACAGTGTCCTTGCTACCAAGGCCATATATAACTATTACCGTAGTCCTGACATGGGAGATGCTATTGAATTCTGCATACATGTAACTACCCCACTTGAAAAGGTTTCACTTATGAAACACAGAATACAAAGTTACATTGATAACAAAAAGGAGCACTGGTATCCTTCACCTTTCATAGTCTTCAAGGATCATGAACAGTTAAACATGGTGAAAATAGCTATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGGTATGTCAGAAGATCCCTTTTGATTGAAGAGATGATCAAGATTTTCCGTGAACTTGACATTAATTACCGTCTCTTGCCACTCGACATAAACATTAGAGCCTTGCCTACCACTACTGAAAGGCTTCCACCAAGTTGGTCAACAATTACAAATTGA 2574 0.4495 MQTIRKSFKSYGSYNKRSGRFPSTGNPDSDPEQLPILLDQENHRHTHSFPMAGDCVVKIDDADPSQTNKIWRESSYDFWQEEGNAHEESFDFRQKGQAEDPPSQLIGRFLHKQKVSGGEMSLDMDLEMEELQNDGSGKLTPVEESPMTHQEGTARTRRRSRTGNGGDGEVVRCTSNASFERNLSMQRKSALLKVKTRSRLMDPPEEPDKKSSRVLKSGQLLSGFLGKKGDDEEEDPFLEEDLPDEFKENHFSFWILLEWLSLILIIGVLITTLSIPYLRNKNLWNLKLWKWEVMVLVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVKKAVQNCMWLGLVLIAWHLLFDKRVQRETNSNFLEYVTKVLVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQKAEEEEERLADEVQKLQNAGSGRLKSGALQKSPRIKSGKFSRPLSKKSDDGNGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALSTLDEHILDSPHDDENATQIRSENEAKAAAKKIFQNVARRGCRYIYPEDLMRFMREDEAAKTMNLFEGATDTGRISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFVVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKVIIPNSVLATKAIYNYYRSPDMGDAIEFCIHVTTPLEKVSLMKHRIQSYIDNKKEHWYPSPFIVFKDHEQLNMVKIAIWPTHRMNFQDMGERYVRRSLLIEEMIKIFRELDINYRLLPLDINIRALPTTTERLPPSWSTITN* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2664 857 MobiDBLite consensus disorder prediction 471 485 - -
Apr8g2664 857 Pfam Mechanosensitive ion channel 624 828 IPR006685 GO:0016020|GO:0055085
Apr8g2664 857 SUPERFAMILY Sm-like ribonucleoproteins 672 731 IPR010920 -
Apr8g2664 857 MobiDBLite consensus disorder prediction 1 30 - -
Apr8g2664 857 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 147 855 IPR016688 -
Apr8g2664 857 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 5 140 IPR016688 -
Apr8g2664 857 MobiDBLite consensus disorder prediction 194 213 - -
Apr8g2664 857 Gene3D - 682 731 IPR023408 -
Apr8g2664 857 MobiDBLite consensus disorder prediction 150 165 - -
Apr8g2664 857 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 147 855 - -
Apr8g2664 857 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 140 - -
Apr8g2664 857 MobiDBLite consensus disorder prediction 1 48 - -
Apr8g2664 857 PIRSF Memb_At2g17000 41 857 IPR016688 -
Apr8g2664 857 MobiDBLite consensus disorder prediction 83 102 - -
Apr8g2664 857 MobiDBLite consensus disorder prediction 451 486 - -
Apr8g2664 857 MobiDBLite consensus disorder prediction 198 213 - -
Apr8g2664 857 Coils Coil 425 448 - -
Apr8g2664 857 MobiDBLite consensus disorder prediction 134 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2664 Apr-Chr8 36400895 36405005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2664 54 854 Mechanosensitive Ion Channel Family AT1G78610 62.105 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2664 K22048 - gmx:102665658 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2664 8 36400895 36405005 Apr8g2664 8 36400895 36405005 ECH