Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2650 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCGGGTTCGGACGGATTTACACGGTCAGGTTCAGATGCTGGAGGTAGACAGGATGGGCTTTTGTGGTACAAAGACTCGGGGCAGCACTTGAATGGTGAATTTTCAATGGCTGTAGTCCAAGCCAATAACTTGCTGGAAGATCAGAGCCAGATTGAATCAGGCAGTTTGTGCGCCAATGAATCTGGCCCTTATGGTACCTTCATTGGTGTCTATGACGGGCATGGAGGGCCTGAGACATCGCGGTTCGTCAATGATCATCTGTTTCCCCATCTCAAGAGATTTGCTTCAGATCAACAATCAATGTCAGCGGATGTAATTCGCAAGGCACTTCAAGCAACAGAAGAGGGGTTTACGTCAGTGGTTGCCAGACAGTGGTCAATATCACCACAGATTGCGGCTGTTGGGTCATGCTGTCTGGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCAAATCTTGGGGATTCCCGGGCTGTTTTGGGAAGAGCAGTCAAGGCAACTGGTGAGGTTTTAGCCATGCAATTATCAACAGAGCACAATGCATCAATAGAGTCTATAAGACAGGAGCTGCATTCTTCGCACCCTGATGATCCAAACATTGTTGTTTTAAAGCATAATGTTTGGCGTGTGAAGGGCCTTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAACCACTATATGCTAAGTTTCGACTTCGTGAGCCATTCAAGAGGCCAATACTGAGCTCAGAACCATCAATATTGGTTCATCATTTGCAGCCAGTTGATCAATTTATTATATTTGCTTCTGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAATCCCCACTGTGGAAGTGCAAGGAGGCTGGTAAAAACTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGGTATTCAGATCTAAAGAAAATCGACCGTGGAGTTCGTCGACATTTCCATGATGATATCACAGTCATTGTTGTGTATCTTGACTCAAATGTCATGAGCAGGGCAAGCACTGTGAAGTTTCCTAGTATTTCTGTGAGAGGGGGTGGTATCAACCTGCCTCATAACACACTGGCACCTTGTACCACACCAACATAG 1179 0.4453 MLSELMNFLRACFRPGSDGFTRSGSDAGGRQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGSLCANESGPYGTFIGVYDGHGGPETSRFVNDHLFPHLKRFASDQQSMSADVIRKALQATEEGFTSVVARQWSISPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSTEHNASIESIRQELHSSHPDDPNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSILVHHLQPVDQFIIFASDGLWEHLSNQEAVDIVQNNPHCGSARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSNVMSRASTVKFPSISVRGGGINLPHNTLAPCTTPT* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2650 392 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Apr8g2650 392 SMART PP2C_4 39 353 IPR001932 -
Apr8g2650 392 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Apr8g2650 392 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 385 - -
Apr8g2650 392 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Apr8g2650 392 Pfam Protein phosphatase 2C 75 325 IPR001932 -
Apr8g2650 392 PANTHER ALPHABET, ISOFORM E-RELATED 5 385 - -
Apr8g2650 392 CDD PP2Cc 48 355 IPR001932 -
Apr8g2650 392 Gene3D - 37 366 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2650 Apr-Chr8 36294012 36299121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2650 1 392 PP2C-type Phosphatase Gene Family AT4G38520 74.490 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2650 - K01102 gmx:100794801 727.628