Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2635 ATGGGTAGTTGTGGAAGAGAAGGAGCAGTAAGGCAGTATATAAGATCGAAGGTACCTCGTTTAAGGTGGACGCCTGAGCTGCACCGTTGCTTTGTTCATGCCATTGAAAGTCTTGGTGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTGATGGATGTGAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGAGGTGACTTGGGCAGACAAGGTAGGACACCCTCCCAACATAGAAACCAATCTTTTGAGGATCATGATGATGGGTGTGTTGATGAAGTGAATGATATTGGTGTTGAGTACTCTTGTTCGAAACCAATGGGAAGAGAATCTGATTCCTTCTTCGGCTACAGTAATTTCCCCTCAAAAAGAGCCAGAATCGAGACGAAGAGTTCCATCTCAGAGAGCTGCAATGCAGCCAAAGATTATCCCATGGCTGAGCACAAAGGAATAAAGGAGTTCTGTGAAGCTTCAAGAATATGGCAGACACAAACCCATTCCTCTCTGCTACCACATTTTCCCAACCTCACTTCATTCAGATCTTCTAACCAAGAATCTGATTTCCTTCAGGTTGCTAAATTTAATGAAGGAAAGACCACTTCACAGCCAATTAATGTACTTGAGAACACTGAGACAGCTCATAGAGAGGTTGAAGGTGTAGGAGGGTATGAATTGTCATTGTCGCTTACATTGCCAAATCCTTCCCCTCAGAGAAGCAATGCTTCTTCGGCCAGTGAGATCAGTGAAGCTATCTCCTCGTGCCCTGGGTTTAGCAACTACAAGAATTGCTCTAGTTCATCCAATGTCAAAGAAATAATTAATTTAGACCTATCTTTAGCTCTATGTGGCAGTTGA 882 0.4365 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIESLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEDHDDGCVDEVNDIGVEYSCSKPMGRESDSFFGYSNFPSKRARIETKSSISESCNAAKDYPMAEHKGIKEFCEASRIWQTQTHSSLLPHFPNLTSFRSSNQESDFLQVAKFNEGKTTSQPINVLENTETAHREVEGVGGYELSLSLTLPNPSPQRSNASSASEISEAISSCPGFSNYKNCSSSSNVKEIINLDLSLALCGS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2635 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Apr8g2635 293 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Apr8g2635 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 156 292 IPR044848 GO:0003700
Apr8g2635 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 152 IPR044848 GO:0003700
Apr8g2635 293 MobiDBLite consensus disorder prediction 76 98 - -
Apr8g2635 293 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Apr8g2635 293 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 156 292 - -
Apr8g2635 293 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Apr8g2635 293 Gene3D - 18 74 - -
Apr8g2635 293 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2635 Apr-Chr8 36179129 36182371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2635 1 74 G2-like Transcription Factor Family AT1G14600 73.418 5.49e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr8g2635 Myb_DNA-binding 3.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2635 - - gmx:100787188 411.764