Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2628 ATGGAGCTTTCTGCATTTCCGAGCTTCAAAGCAGCTTCTAATGCTTCGTTACTTCCATTTTATTCGAATCAAGTTTGGTGCCGATGTTCTTTTCGTCTTCGTCGTCGAGATTATGGCTTTCGTTGGACTCGCAAGTCAAAACCGTTTATTCGGATCAAGATGTGCTCGGAGAAAGGCTCGTCGTCAAACGGTTATGGTGGAATCGAGAGCGGAGAAACGAAATCTGATTTTGTCGAAGTGATTGGCATTGGCTCTAGGAAGGACGCGGTTTTTGATTTCTGCTTGAACTCGCCGTTTCAGCTATTGTCGCTGCGATTTTGGAATATTCTTATGAAAGAAGCACAAGAGGTGCAATTACAGCAAAGGTCAATTGAAGAAGAACCTTGTCCAAGAATTGTCAAAGCTCCAGTATTTTTGAAGTCGTGTTCAAAGACTATTGTCCTTGTGGCTAGTGCAGGATATGGCTTGGACCACACTGTTGCAGTTGATATTTTTGAAACTGTAAGGTCCAGAAATGGATTGGCAGTTGCTATAGTTTTGAAGCCTTTTAGATTTGAAGGGCTTAGACGACAAGATGAGGTGAAAGCTTTGATGGGGAAACTTAAGGAGAGCACAAGTGTACTTATTGAGATTGATATTGATGCCCTACTCAAAAAAGATTTGTTGACTCTAGATGAGGCCATGAGGACTGCAAATGATGCAGTTTTGCTAGCAATTAAGGCCGTATCTGTTTTAAAATCTGAGATGCACATAAAATTTATAGATAGATTGAATGATAGCATGAAAGAGGCCAGCACTTCAGAAATTAACAAAATATTGGAATCCTATAAGGAAGCAGGGATTGGATTTGGAGCTGCATATGACATCAAAACTTCGATTTTGCAGTCTATATTTGATAGTCCTTTCCTTGGAGTTCGTTTGAAGGATCCAAATAGTGTAGTTATATGCATTCTTGCATGTTCAGCACCCATCACTGATAGTGATTTAGCGACCTTTCTGCATACTTTCCGTCAAACAACAGAATACACAGGGGATATCATAATATTGGCAATACATGAGCCTGATGTTGAGCCCAACCTACTGATAACAACAGTCCTTGCACTTGGCAGTTTAAATGTTCAACAGTCTTCCCAGAATGTTGGTCTACTGTCCAGACTTGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATAATCAGCAACAAGTTGGCACTAGGAAAGAGAATGCAGCATCTCCTAATGAACTGATGAGCTCTTACAACATTGATGAGGAGACAAATAGGATTGATTCTGATGTCATAGATGGCAATCTCAACAAATACTATGAAGAGTTGGAGCCGACAATGATCAACGACATCTTAAAGTTTCCTGCTTCAAGGGATTCTGAGAAAAATGAAGATTTATTTGACACTATAGCCAACTATAACATCCTTAATGACTCCATTACTGAAGGAGTTGCATTAGGTGACGCAGCTTTTCAAAGGGAGCAACTTGAGAATTGGAATTTAGGTCCTGGATTTGAGGTGGCAAAGGAGTGGGCCCAAGAAAGGGCAGCTGATGCTACATCAATTCTTGATAACCTAAGCATCTTCCACCTTCCTGTAGGTGTGAGGCCTTCAGAAGAGTTGCAAGACTCTTTTGAAATCTCGTTTATGACAAAACAGCATGATCTGGAAACTGATAATGATGTGAACGCACCAACATTAAATGGAGGTATGTCTCCTTGGAGTGCAGTGACTGATGCAGGCTTGGAAGCAGTGGTGGAATTTGCATCTTCACTTTTGAAGGGAAAGAATGCTAATAAACCGAAGAAGCATGGAGTTCTATCTGTTCGCGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAATCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGTCTGATTCTCTGGGATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGCCTAGGTACATTCTATTTAAAAAATGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATACATGGCAAGGGTTGGTTTTATTTTCACACTGGAGATCGGTGGTTTGCAAACTTTTGGAAAGGAAAGGCTAATGGTGAGGGGCGGTTCTATACGAAGTCTGGTGATGCCTTCTTCGGCAATTTCAAAGATGGATGGCGGCATGGCCAGTTTCTTTGCATTAATGCGAATGGGACAAGGTACACCGAAATTTGGGAACATGGTGTTCTTGTAGATAGCAAGCATTTAGACAGATGA 2325 0.4163 MELSAFPSFKAASNASLLPFYSNQVWCRCSFRLRRRDYGFRWTRKSKPFIRIKMCSEKGSSSNGYGGIESGETKSDFVEVIGIGSRKDAVFDFCLNSPFQLLSLRFWNILMKEAQEVQLQQRSIEEEPCPRIVKAPVFLKSCSKTIVLVASAGYGLDHTVAVDIFETVRSRNGLAVAIVLKPFRFEGLRRQDEVKALMGKLKESTSVLIEIDIDALLKKDLLTLDEAMRTANDAVLLAIKAVSVLKSEMHIKFIDRLNDSMKEASTSEINKILESYKEAGIGFGAAYDIKTSILQSIFDSPFLGVRLKDPNSVVICILACSAPITDSDLATFLHTFRQTTEYTGDIIILAIHEPDVEPNLLITTVLALGSLNVQQSSQNVGLLSRLALHFPLVFSFWGRHNQQQVGTRKENAASPNELMSSYNIDEETNRIDSDVIDGNLNKYYEELEPTMINDILKFPASRDSEKNEDLFDTIANYNILNDSITEGVALGDAAFQREQLENWNLGPGFEVAKEWAQERAADATSILDNLSIFHLPVGVRPSEELQDSFEISFMTKQHDLETDNDVNAPTLNGGMSPWSAVTDAGLEAVVEFASSLLKGKNANKPKKHGVLSVRAASMLEAERDLSKKWNPVVEMQYRGGRYKGRCQGGLPEGKGRLILWDGSIYDGLWRYGKRSGLGTFYLKNGDMFQGSWRDDVIHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYTEIWEHGVLVDSKHLDR* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2628 774 Gene3D Tubulin/FtsZ, GTPase domain 112 369 IPR036525 -
Apr8g2628 774 SUPERFAMILY Tubulin nucleotide-binding domain-like 80 243 IPR036525 -
Apr8g2628 774 Gene3D - 718 772 - -
Apr8g2628 774 Gene3D - 664 717 - -
Apr8g2628 774 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 1 774 - -
Apr8g2628 774 SMART morn 663 684 IPR003409 -
Apr8g2628 774 SMART morn 732 753 IPR003409 -
Apr8g2628 774 SMART morn 686 707 IPR003409 -
Apr8g2628 774 SMART morn 640 661 IPR003409 -
Apr8g2628 774 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 1 774 - -
Apr8g2628 774 Pfam MORN repeat 665 687 IPR003409 -
Apr8g2628 774 Pfam MORN repeat 735 746 IPR003409 -
Apr8g2628 774 Pfam MORN repeat 688 710 IPR003409 -
Apr8g2628 774 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 639 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2628 Apr-Chr8 36103222 36131507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2628 1 773 PP2C-type Phosphatase Gene Family AT1G75010 45.051 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2628 - - gsj:114371951 1275