Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2607 ATGGCATCGAAAGTTGTTCTTCCCAAATGGGCGTCGAAGCCATGCATGATGGGAATCGACGAAGCTGGAAGAGGTCCCGTTTTAGGTCTCTTTCTCTTTCACATTCTAAATTTCTCTCTTTACGCGTTTATTTTCTTAATAACGTATTTTGGAAATTGTTTAAGGTCCCATGGTCTATGCTTGCTTGTACTGTGCTTCCTCCTACATGAAAACCCTAGCTACCTTGAGTTTTGCGGGAACAAGATAAACTTGAATGAGATATCACATGAATCTGCCATGGGTCTCATCGATAGGGTACTCAAAATGGGAGTGCTTCTAACTGAGGTTTATATAGATACAGTTGGAGATGCAGGGAAATATGAAATGAAGCTGTCTAAAATTTTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCGGATAGTCTTTATCCTGTTGTCAGTGGTGCAAGTATTGTAGCAAAGGTGACAAGGGACCGTGCTTTAAAAGAATGGGTGCTTGATGAGACCGCTGAAAACATGCATAGGAACTTTGGCTCTGGATATCCCGGAGATCCCCAAACCAAGTCTTGGCTAGAACATCACAGACACACTATCTTTGGGTTTCCAACATTGGTCCGATTTAGTTGGGGAACCTGCAACACTTATTTTAAAGATATTGCAGAAGTGTTATGGGAGTCTGACAATTTGGATGAAGATGGTTGTAGCACCAATAATAATGGCAAGCGGCAATTAAAATTAAGCAATATGGGTTTCACCACATCCAAGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGACGCTCTAGGTTTTTTCAGGCTCGGAAACTTGAGCACCTCTCTTCCTTTTAA 849 0.4111 MASKVVLPKWASKPCMMGIDEAGRGPVLGLFLFHILNFSLYAFIFLITYFGNCLRSHGLCLLVLCFLLHENPSYLEFCGNKINLNEISHESAMGLIDRVLKMGVLLTEVYIDTVGDAGKYEMKLSKIFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALKEWVLDETAENMHRNFGSGYPGDPQTKSWLEHHRHTIFGFPTLVRFSWGTCNTYFKDIAEVLWESDNLDEDGCSTNNNGKRQLKLSNMGFTTSKRSEEIESSGKGRSRFFQARKLEHLSSF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2607 282 Gene3D Ribonuclease hii. Domain 2 172 221 IPR023160 GO:0004523
Apr8g2607 282 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 83 221 IPR024567 GO:0004523
Apr8g2607 282 SUPERFAMILY Ribonuclease H-like 15 217 IPR012337 -
Apr8g2607 282 CDD RNase_HII_eukaryota_like 17 218 - -
Apr8g2607 282 Pfam Ribonuclease HII 79 212 IPR024567 GO:0004523
Apr8g2607 282 Gene3D - 69 171 IPR036397 GO:0003676
Apr8g2607 282 PANTHER RIBONUCLEASE H2 SUBUNIT A 4 34 IPR001352 GO:0003723|GO:0004523
Apr8g2607 282 PANTHER RIBONUCLEASE H2 SUBUNIT A 80 280 IPR001352 GO:0003723|GO:0004523
Apr8g2607 282 PANTHER RIBONUCLEASE 4 34 - -
Apr8g2607 282 PANTHER RIBONUCLEASE 80 280 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2607 1 282 Core DNA Replication Machinery Family AT2G25100 54.196 4.92e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2607 K10743 - gmx:100779875 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2607 8 35956739 35959303 Apr8g2607 8 35956739 35959303 ECH