Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2596 ATGGGAAAGAAAGCGTTGAAGCTTCCTTTTCCTTCTCTTTTCAAAACCAAGGAAGCACAACCTAGAAAGCATTCATGGCAATTCATGCCCTCTTGTGGCCACCCCAAGACCCTCTCTTTCCGTGATGGAGATGACATCTTCAAGACAGTTAATTCTGTATTCTTTGACCCTTCTGAGAGCACTATTGAAACTCCAAAGTCTTGGTTCACAACCTCGTCTGAATCTGCCAGCATCTCCACCGAGTCTGAAGACTACAACTACAACTGTGATGGTGAGTCTTTGGAGATGTTAGTACGTGGGGTGAGGTCAGAGAGGCTTTTTTTCGAACCCGGTGACACAAGCTCCATCTTGGAGAAGGCTAAGGCTAGTGGGTTTCCGTTCAAAGAAAGTGTGGTGCTTGCTATGGAATCAGAGGATCCATTTGAGGACTTTAGGAGATCAATGGAAGAGATGGTTGAGTCTCATGGTGTTAGAGATTGGGAGGGTTTGGAGGAGCTTTTGAGTTGGTATTTGAGGGTCAATGGTAAGAAAAATCATGGCTTTATAATAGGTGCTTTTGTTGATTTGCTTATTAGTATCACAGCTTCTACATCTAACTCTTGTACTAATTCAACTACCTATTCTTCTGCTGTTTCTTCCTTTGCTTCTTCACCTTTGTGTCGTCTATCTCATGTCCAGAATGTTATTGAGATTGTCGAGCATGAAAATGAAGATCCTGTAATGTCTTAG 729 0.4266 MGKKALKLPFPSLFKTKEAQPRKHSWQFMPSCGHPKTLSFRDGDDIFKTVNSVFFDPSESTIETPKSWFTTSSESASISTESEDYNYNCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPFEDFRRSMEEMVESHGVRDWEGLEELLSWYLRVNGKKNHGFIIGAFVDLLISITASTSNSCTNSTTYSSAVSSFASSPLCRLSHVQNVIEIVEHENEDPVMS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2596 242 Pfam Transcriptional repressor, ovate 137 193 IPR006458 -
Apr8g2596 242 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 219 IPR038933 GO:0045892
Apr8g2596 242 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 193 IPR006458 -
Apr8g2596 242 ProSiteProfiles OVATE domain profile. 133 192 IPR006458 -
Apr8g2596 242 PANTHER TRANSCRIPTION REPRESSOR OFP13 11 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2596 Apr-Chr8 35867894 35868716 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr8g2596 Ovate 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2596 - - gmx:100527123 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2596 8 35867894 35868716 Apr8g0899 8 9901702 9902475 ECH
Apr4g0364 4 3103462 3104507 Apr8g2596 8 35867894 35868716 ECH
Apr8g0655 8 6041188 6042442 Apr8g2596 8 35867894 35868716 ECH
Apr8g2596 8 35867894 35868716 Apr8g2596 8 35867894 35868716 ECH