Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2592 ATGGCGGTTGCAAGTATGGGCTCCGTCGGTGGTCTGTGCGACACGAAGGGCTTAATCGTCCAAGTTGTAACGGGACGGTGGTTCGTGGTGTTTGCCTCCTTCTTAATCATGGCAGTCGCCGGAGCCACCTACATGTTTGGCCTTTATTCCGAAGATATAAAAAGGAACCTCGGCTACGACCAAACCACCCTCAACCTCCTTAGTTTCTTCAAAGACTTGGGTGGCAATGTTGGTGTCCTCTCAGGCCTAATCAATGAGATCACTCCTCCTTGGGTGGTACTCGCCATGGGTTCCGTTTTGAACTTTTTCGGTTACTTCATGATATGGCTTGCGGTGACTAAAAGAATAGCAACACCCAAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCTTTTGCCAACACTGGTTCCTTAGTCACATGCGTCAAGAACTTCCCTGAGAGTCGTGGGGTTGTGTTGGGTATCCTCAAAGGCTATGTTGGTCTTAGTGGAGCTATCATCACGCAACTCTACTTTGCTTTTTATTACACCGACTCGAGGTCTTTGATTTTGCTCATAGCGTGGCTTCCAGCTGCTATTTCCTTTGCTTTTCTTCGAACCATTCGCTACATGAAACCGGTTCGCCAACCTAATGAACTAAGCGTTTTCTATAAGTTTTTGTATATTTCTCTTGGACTTGCTGGGTTTCTCTTGGTTATGATCGTAGTGCAGAAAAAAGTGTCTTTCTCTCAGAGTGAGTATGGGGTGAGTGCTGGTGTGGTGCTTTTCCTTCTCTTTCTCCCTCTTGCTGTTGTTTTTGTTGAACAGTACAAGATCAGAGAGAGTCAGAAGCTTGCTTTGGTTGATCCAGTGCCAGTGCAAATAATAGACGGAGGAGGGTTTGAGTCTGCAAATGGTAACTCGCTCTCGGCTCCAACATCGAAGGTTGAAGAAACTAGATGGTGGCAGAATGTTTTTAGCCCACCAGCTAGGGGTGAGGACTATACCATTCTTCAAGCCCTTTTCAGCGTAGACATGATATTGCTGTTCTTCGCTACTACTTGTGGTGTTGGTGGCACTCTGACAGCAATTGACAATCTGGGTCAAATTGGTACCTCATTTGGATACCCAAAGACAAGCATAAGCACATTCGTGTCCCTAGTAAGCATTTGGAATTATCTGGGAAGGGTTTTCTCTGGTTTCGTTTCTGAACATTTTCTAACAAAGTACAAGTTTCCTCGACCACTCATGCTCACGCTAACTCTCCTCTTATCCTGTGTCGGTCACCTTCTTGTAGCATTTAATGTGCCCAATGGTCTCTACGTGGCTTCTATAATCATTGGGTTTTGTTTCGGCGCACAATGGCCCTTGGTCTTTGCCATAATTTCAGAGCTGTTTGGGCTCAAATACTATTCAACTTTGTACAACTTCGGCGGTGCAGCAAGCCCAATTGGCCTTTATGTGCTTAATGTCAGGGTCGCAGGGCACTTGTATGATAAAGAAGCTATGAAGCAATTGGCTGCAACGGGTATTCCAAGGAAAATTGGGCAAGAATTGAGTTGTGTTGGGACCAGTTGCTTCAAGTTGTCCTTCGTTATTATCACTGCAGCCACATTTTTTGGTGTCATTATTTCGCTGATTTTGGTGGCCAGGACTATTAAGTTTTATAAGGGTGACATATACAAGAGGTACCGGGAGCAGGCCGAAGAAGCCACCACTGAGATGACGGTGGTCCAAAACGGTGGCGAGAGAGGACAAGAACTCAAACGTGGGGTGTAA 1773 0.4585 MAVASMGSVGGLCDTKGLIVQVVTGRWFVVFASFLIMAVAGATYMFGLYSEDIKRNLGYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAMGSVLNFFGYFMIWLAVTKRIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAFYYTDSRSLILLIAWLPAAISFAFLRTIRYMKPVRQPNELSVFYKFLYISLGLAGFLLVMIVVQKKVSFSQSEYGVSAGVVLFLLFLPLAVVFVEQYKIRESQKLALVDPVPVQIIDGGGFESANGNSLSAPTSKVEETRWWQNVFSPPARGEDYTILQALFSVDMILLFFATTCGVGGTLTAIDNLGQIGTSFGYPKTSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYKFPRPLMLTLTLLLSCVGHLLVAFNVPNGLYVASIIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGAASPIGLYVLNVRVAGHLYDKEAMKQLAATGIPRKIGQELSCVGTSCFKLSFVIITAATFFGVIISLILVARTIKFYKGDIYKRYREQAEEATTEMTVVQNGGERGQELKRGV* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2592 590 Pfam Major Facilitator Superfamily 347 546 IPR011701 GO:0022857|GO:0055085
Apr8g2592 590 SUPERFAMILY MFS general substrate transporter 26 552 IPR036259 -
Apr8g2592 590 Gene3D MFS general substrate transporter like domains 339 554 IPR036259 -
Apr8g2592 590 CDD MFS_Mch1p_like 25 540 - -
Apr8g2592 590 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 585 - -
Apr8g2592 590 PANTHER MFS TRANSPORTER 10 585 - -
Apr8g2592 590 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2592 Apr-Chr8 35836782 35839079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2592 16 565 Nodulin-like Gene Family AT2G39210 70.324 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2592 - - gmx:100808975 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0227 4 1926916 1929171 Apr8g2592 8 35836782 35839079 ECH
Apr8g0535 8 4727151 4728911 Apr8g2592 8 35836782 35839079 ECH
Apr8g2592 8 35836782 35839079 Apr8g2592 8 35836782 35839079 ECH