Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2586 ATGTTCCACAAAGGAACCACAAATGCCACCGTGCCCCTTGCGAACCAGCATGCTGAGAGCCAACAAACCGAAGATACTTCCACAGATATTGACACTGATGATAAAAACCAATGTTTCTCGACGGTGTCATGGTGCAATGGAGTTCGGGATGGAGGGCTTGTAGTTGTGGACTCACAGGACCAAAGTAAGACTAAGGTTAAAGCTGGTGATCACAAGACTCTTCGCAGGTTGGCTCAGAATCGAGAGGCTGCAAGGAAGAGTAGGCTAAGGAAAAAGGCATATGTGCAGCAATTGGAGAACAGTCGACTTAGACTTGCACAATTAGAGCAAGAGGTTCAACGTGCACGTCAACAGGGTGCATTTGTTGCAACTGGAATCACGGGGGATCGTGGTCATTCAGTTGTTGGAAATGGTGCGTTAGCATTTGACATGGACTATGCCCGATGGGTTGACGAACATCAACGGCTGATCAATGACATAAGATTAGCTATAAATTCTCAAATGGGTGATAATGAACTGCATCTTCTTGTTGACGGAGTCATGGCACATTATGATGAATTATATAGGTTAAAGAGCATAGGAGCAAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGATGACACCTGCAGAAAGATGCTTCATATGGCTTGGAGGATTTCGTTCATCTGAAATTCTCAAGATAGTTAGAAACCAACTTGAGCCGTTAACCGATCAACAGCTGATGGGCATTTACAATCTGCAGCAGTCTTCCCAGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCAACAATCTCTTTCAGAGACACTTTCCTCCACCTCTCTAGGACCTGCAGGTTCTGGAAATGTTGCCGAGTACATGGGCCAGATGGCAATTGCATTAGGCAAGCTTGCCACACTAGAGAGTTTTGTTCATCAGGCTGACCTCTTGAGGCAACAAACACTGCAGCAACTGCGACGAATTTTGACCACACTCCAAGCGGCTCGTGCTCTCCTTGTCATAAATGATTATGTCTCACGACTTCGAGCTCTTAATTCATTATGGTTAGCGTGTCCTAAAGAGTACTAG 1080 0.4546 MFHKGTTNATVPLANQHAESQQTEDTSTDIDTDDKNQCFSTVSWCNGVRDGGLVVVDSQDQSKTKVKAGDHKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQEVQRARQQGAFVATGITGDRGHSVVGNGALAFDMDYARWVDEHQRLINDIRLAINSQMGDNELHLLVDGVMAHYDELYRLKSIGAKADVFHILSGMWMTPAERCFIWLGGFRSSEILKIVRNQLEPLTDQQLMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSTSLGPAGSGNVAEYMGQMAIALGKLATLESFVHQADLLRQQTLQQLRRILTTLQAARALLVINDYVSRLRALNSLWLACPKEY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2586 359 MobiDBLite consensus disorder prediction 1 25 - -
Apr8g2586 359 Gene3D - 71 121 - -
Apr8g2586 359 PANTHER TRANSCRIPTION FACTOR TGA9 18 358 - -
Apr8g2586 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 75 90 IPR004827 GO:0003700|GO:0006355
Apr8g2586 359 Coils Coil 91 118 - -
Apr8g2586 359 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 18 358 - -
Apr8g2586 359 SUPERFAMILY Leucine zipper domain 72 111 IPR046347 GO:0003700|GO:0006355
Apr8g2586 359 Pfam bZIP transcription factor 72 111 IPR004827 GO:0003700|GO:0006355
Apr8g2586 359 Pfam Seed dormancy control 157 231 IPR025422 GO:0006351|GO:0043565
Apr8g2586 359 MobiDBLite consensus disorder prediction 1 32 - -
Apr8g2586 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 70 114 IPR004827 GO:0003700|GO:0006355
Apr8g2586 359 CDD bZIP_HBP1b-like 72 124 - -
Apr8g2586 359 SMART brlzneu 68 121 IPR004827 GO:0003700|GO:0006355
Apr8g2586 359 ProSiteProfiles DOG1 domain profile. 139 355 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2586 Apr-Chr8 35788146 35791328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2586 46 358 bZIP Transcription Factor Family AT1G68640 70.288 8.60e-153 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr8g2586 DOG1 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2586 K14431 - gmx:100775783 588.956