Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2580 ATGGCCACCAATGCCTGTGACTCTCGTCGCAAGCATCACCGATCATCCTCTCCGGAGGAAATGGAGAAATCCTCGAAGCGACACAAGCACCGCCACCATAGTCACCGCCACCGCCACGGAAGCAAAAAACGCGAGGCAGAGATTGAATACGATGAAGGAACGGTTGCTGCGGTTCCGTCTCCAACTCCCCCTCCTAATCTTCGTCCGCACAGCCATCTCCCTGACGACGATGTGGAGGAGGGAGAAATCCTCGAAGATGAGGCTTTTGACGGCGAAGTTGGAAAAAAGCAGACGGAATCTGATGTCGAACCGGGTGAAATCAAGGTGACAGGAGATCGAGATGCTCGATCTGATAATCGAATTCAGGAACGCTTTACTAAAAAAAATTCAGAAGCTAGAGATAAGGACATTAGCAGTGATGATGGTTCTCCTAACCATGGTGCCAGGCCTAAAGATGGAAAGAATGCTCGAGCTAGTACTGATGGTGTGGGCAATGGTTATTTGGATCCTAGATCTTCCAAAGGGGATAAGTGGCAGAATGGGGAACTTGGACATTTTAAAGGAAATAAGAAACTAAAAGGTGACTTTGATGACAAAACACTGGAGGCTAATTCAAGAACAGTATGTTACCAGAGGAACTCATCCTCGGAAAGTGGAGGAGAAAAATATAGAATGTTAGGAAATTCTCCTTCTCATGATAGATATAGAAGTCGATCAAGATCAACTGGTCATACTAGGGACAGATCTCGTTCTCGTAGTATCGTAGAAGAGTATGCTCATTCCAAGAGAAAGCACTCTGGGGATCAAGGGTCCCTTTATTATACTGGAAGACATAAGACTGATTATGACCACGATGAGGAAAAAGTGAGGGCACATGGAAGAGAGCATGGTCATGGCAATATAGATTTGGTGGTAGATGATAGAAGGGACTACAGTACCAGATATCTCAGTCGGGAGGCCCGGGATAGGGATAGGAGTAGGGAGTCTAGGGACAGAGATGTGGATAGAGACTTATACAGAGAAAGGAGACAAGAGGAAACAAGCAGGGGTAAGGAGATTGAGTGGGAGCGCAAAAGAGTAAAAGAAAGTGATAGGAGCCATGAGAGGTATAGAAGGGATGTAGAAAATGATAGGAGCAGGGAAAGGGAGGATGATCGGGACAGGAGACGAGAAAAGGAAAGGGAGATGGTATTTGAGAGGGATAGGAGAAGGGAGAAGGAAAGAGATAGAAGTAGGGACAGAACAAGGGGTAGCGAGAGAGATAGAGACCTGGAGAATGAAAGGGTTGGTAAGAATCGGGGAAGGGATAACATTAAGGAGAGGGAAAGGCGAGATGATAGATATAAGTACAAGGATAGAGACACTTCAAATGGTAAGGATAGGCATCTACGTCATGAGGATGGTAATGAGAACGGAGATAAATATAGAAAACATTCAAGACATGAAGAAAATGAATACCATCGGGAAAGAAAAAGAAATTCTGATAATCCTCCAAAGTTTTATAATTCAATGGGAAGTACTATGGAAGAGGATGCAAGCAAACTAACAAGCAGTGAGGTTGAACCGGATGACCTAGAGGAAGATACATTGCACTTACCTGAGCAAGAAGAAGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAACAAGAGGTTGGAAATGAAGGAAAAGACAAGGATACAGGCATTCCTACAAACATTTCTGAAGCACGTGATGGTAAGAAGGGTGTTGATTATGAGGAGCCATCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAACGTTGCTTCTAAGAAGATATCTGGGGCTGGAGGCCTGGGAGAGGGTACTCCAAAGAGTGAGAGGTCTGATGACAAGTTTTGTGATGATATATTTGGTGAGACACCTACAGGAGTTCGGAAATCAGGAAAAGGAGATGGTTTACTGATTGAGAGGGTTGACCTACATGACAATTGGGATGACGCAGAAGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTCACTGCTGCACACGGAAGGGGTGTCTTTTCAACAGTTGTTCGGGCAAAGAACCTTAAGATAGGAAATGGCGAGCCAGAAGAAGTGGCAATAAAAATTATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAAGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATATGCAAAACAGCTTTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAATGAGGCCAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCGTATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAATTGCATACAGGGAAGGTTCTTTTCCCTGGACTTACAAACAATGACATGCTCCGGCTTCAGATGGAATTGAAGGGCCCTTTTCCGAAGAAGATGCTACGTAAGGGAGCATTTACTGAACAGCATTTTGATCAGGACCTAAATTTTCTTGCGACTGAGGAGGATCCTGTAACCAAAAAGACCATAAAGCGGCTGATTCTCAACATTAAGCCAAAAGATATTGGGACACTCATCACTGGCTCGCCTGGGGAGGATCCAAAAATGTTATCCAACTTTAAAGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGCTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 3021 0.431 MATNACDSRRKHHRSSSPEEMEKSSKRHKHRHHSHRHRHGSKKREAEIEYDEGTVAAVPSPTPPPNLRPHSHLPDDDVEEGEILEDEAFDGEVGKKQTESDVEPGEIKVTGDRDARSDNRIQERFTKKNSEARDKDISSDDGSPNHGARPKDGKNARASTDGVGNGYLDPRSSKGDKWQNGELGHFKGNKKLKGDFDDKTLEANSRTVCYQRNSSSESGGEKYRMLGNSPSHDRYRSRSRSTGHTRDRSRSRSIVEEYAHSKRKHSGDQGSLYYTGRHKTDYDHDEEKVRAHGREHGHGNIDLVVDDRRDYSTRYLSREARDRDRSRESRDRDVDRDLYRERRQEETSRGKEIEWERKRVKESDRSHERYRRDVENDRSREREDDRDRRREKEREMVFERDRRREKERDRSRDRTRGSERDRDLENERVGKNRGRDNIKERERRDDRYKYKDRDTSNGKDRHLRHEDGNENGDKYRKHSRHEENEYHRERKRNSDNPPKFYNSMGSTMEEDASKLTSSEVEPDDLEEDTLHLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEQEVGNEGKDKDTGIPTNISEARDGKKGVDYEEPSFAVGKSPENVNVASKKISGAGGLGEGTPKSERSDDKFCDDIFGETPTGVRKSGKGDGLLIERVDLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKIGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELHTGKVLFPGLTNNDMLRLQMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKTIKRLILNIKPKDIGTLITGSPGEDPKMLSNFKDLLEKVFVLDPDKRLTVSQALNHPFITGK* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2580 1006 MobiDBLite consensus disorder prediction 88 156 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 497 513 - -
Apr8g2580 1006 SMART serkin_6 688 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2580 1006 MobiDBLite consensus disorder prediction 204 222 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 1 547 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 1 25 - -
Apr8g2580 1006 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 366 1006 - -
Apr8g2580 1006 Coils Coil 548 575 - -
Apr8g2580 1006 Gene3D Transferase(Phosphotransferase) domain 1 748 1004 - -
Apr8g2580 1006 SUPERFAMILY Protein kinase-like (PK-like) 675 1005 IPR011009 -
Apr8g2580 1006 PANTHER DUAL SPECIFICITY PROTEIN KINASE 366 1006 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 277 496 - -
Apr8g2580 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Apr8g2580 1006 ProSiteProfiles Protein kinase domain profile. 688 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2580 1006 MobiDBLite consensus disorder prediction 565 593 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 227 267 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 26 41 - -
Apr8g2580 1006 Pfam Protein kinase domain 690 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2580 1006 CDD STKc_PRP4 687 1003 IPR044092 GO:0004674|GO:0006468|GO:0045292
Apr8g2580 1006 Gene3D Phosphorylase Kinase; domain 1 659 747 - -
Apr8g2580 1006 Coils Coil 389 409 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 616 653 - -
Apr8g2580 1006 MobiDBLite consensus disorder prediction 175 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2580 Apr-Chr8 35745850 35755040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2580 641 1005 MAP Kinase Gene Family AT2G18170 30.446 1.36e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Apr8g2580 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2580 K08827 - gmx:100776908 1543.1