Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2569 ATGAAACTGAGCTGCAATGGGTGCCGCATACTCCGCAAAGGTTGCAGTGAGAAGTGCATCATAAGGCCATGCCTTGAGTGGATTAACTCCCCTGAGTCACAAGCCAACGCCACCCTCTTCCTTGCCAAATTCTATGGTCGCACTGCCTTACTCAACCTTATCAACGCTGCTTCCCAACACCATGCCCCAGCTGTATTCAAGTCGCTGTTGTACGAGGCCTGTGGGAGATTAGTGAATCCCACATATGGGTCGTTGGGTTTGTTCTGGACAGGGGAGTGGGCCCAATGCGAAGCTGCAGTTGACGCCGTGCTGACTGGGACCAAAATCAATGGCGTGGCAGCTTTTGATTGGGTGACAGCAGGGACACTTGGTGGAAGTGATCATGTTCCCCCAGCCTGTGATACAGGCCACGTGGCAAGAGGGATCAACGTGGACTACGTGAGAGGGAGAACCGGGTTGAAGAGGGTCGGGCAAGTTACGAAACCCAAACCGCGAGTGGGTTCAGCGGACTCAGCTTGGTTGTGGAAACCGGCTTGGGAGAGGGAGAGCGTGGAAAGCGTGGAGGCTTCGCTGGTGAGCCAGGACGAGCCGAATCGAACGGCGTTGGACTTGGAACTGACTCTTGGCTTCAATTGCGAAACAACCAGTGGCAAGAAAAGACGTTATTAA 669 0.5411 MKLSCNGCRILRKGCSEKCIIRPCLEWINSPESQANATLFLAKFYGRTALLNLINAASQHHAPAVFKSLLYEACGRLVNPTYGSLGLFWTGEWAQCEAAVDAVLTGTKINGVAAFDWVTAGTLGGSDHVPPACDTGHVARGINVDYVRGRTGLKRVGQVTKPKPRVGSADSAWLWKPAWERESVESVEASLVSQDEPNRTALDLELTLGFNCETTSGKKRRY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2569 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 220 - -
Apr8g2569 222 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Apr8g2569 222 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Apr8g2569 222 PANTHER LOB DOMAIN PROTEIN 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2569 Apr-Chr8 35627707 35628987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2569 1 139 AS2 family AT1G67100 57.343 1.85e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr8g2569 LOB 4.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2569 - - gmx:100779034 327.02