Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2563 ATGATGAAGACAATTTCCTCTACTGGTTGTGTGAGTGGGGGAACACTTAGGTTGTGGACAAGACCCCTTCTAACTCTTGTTTGTTTTTGCCATTTACACATGAGACCAGAAGGAAACCCATTAGACCTTAACAATTTGCCTGATGAGTACTCAAGAGATGGCAAACAAGTCCTCGAAGACCACAGCTCCTCACCCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTATGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACAGAGACGCTCAACCATGCTCGTCAACTGGTCTTCCGTAACGATCATAACCTTGCTGCACCAGGTGCCCCTCACCTAGGATGCTGCCAACCAATAGGAGGAGGGGGGTATCATCCATCAGGCAACATGGGAGACCCAACAGTGCCTCTGAGATTCCCAAGATACTTCTCTGCTTCATCCTCAACCCACATGCCACCGCCACCACCACCTCCACCACCATCTCAAGTTCAGCCATATTTATATGCTTCACCTTCACGGCCAGTGTCCTTTCCCTCATCACACTTTCCTCATCAGCATGCTGTGAACGATTATTATGTGGGACATGTGATGAGTAGCAGCCACGGGCACATTGTGGGAGGAGGAGGAGGAGGAGGAGAGAGTACAACAAGTTACACGTGCATTGGTGCACCGGTGGGACAAGGAGGGTTCGGTGGTGGTGGTGGTGTTAAGGACGGGTCACTGCATGGTAATCAGATTCAGGAGGAAGGGTTGAGTTGGGGAAGGAGCTATTCAGGAGCACAGCATCGTTTGGATCCTCCTTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA 909 0.5039 MMKTISSTGCVSGGTLRLWTRPLLTLVCFCHLHMRPEGNPLDLNNLPDEYSRDGKQVLEDHSSSPGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHNLAAPGAPHLGCCQPIGGGGYHPSGNMGDPTVPLRFPRYFSASSSTHMPPPPPPPPPSQVQPYLYASPSRPVSFPSSHFPHQHAVNDYYVGHVMSSSHGHIVGGGGGGGESTTSYTCIGAPVGQGGFGGGGGVKDGSLHGNQIQEEGLSWGRSYSGAQHRLDPPSAINRFQDGF* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2563 302 MobiDBLite consensus disorder prediction 169 189 - -
Apr8g2563 302 PANTHER ZINC FINGER PROTEIN JAGGED 34 259 IPR031113 GO:0007275
Apr8g2563 302 MobiDBLite consensus disorder prediction 174 189 - -
Apr8g2563 302 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Apr8g2563 302 MobiDBLite consensus disorder prediction 56 79 - -
Apr8g2563 302 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Apr8g2563 302 PANTHER ZINC FINGER PROTEIN JAGGED 34 259 IPR045320 GO:0003700
Apr8g2563 302 SUPERFAMILY beta-beta-alpha zinc fingers 83 113 IPR036236 -
Apr8g2563 302 Gene3D Classic Zinc Finger 61 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2563 Apr-Chr8 35575336 35579056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2563 37 253 C2H2 Transcription Factor Family AT1G13400 42.534 2.95e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2563 - - aprc:113871902 550.436