Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2560 ATGAGACTTTCTTTCTCCCCACCACACACCCACCATTGCCACTACCATTATCACTACCCCATCAGGTTCCACCATTCCACGCGCATGGACGCCCCCACTCGCAAAGACAAAGTCATCGTCATCATGGGCGCCACCGGCTCCGGAAAATCTCGTCTTTCCGTCGACCTCGCCACCCTCTTCCCCTTCTCTGAAATCATCAACTCTGACAAAATGCAAGTTTACAGAGGCCTCGACATCACCACCAACAAGATCCCCTTCTACCAACGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTCGAACCCTCTCTCCCCGAGTTCTCCCCATCTGACTTTCGCCGCCGCGCTGCTGACACCATCGCCGACATCACCCGCCGGAAAAAACTGCCCATCCTCGTCGGCGGCTCCAACTCCTTTGTCCACGCTCTCCTCGTTCAACGTTTCGACCCCGAATTCAACGTATTTGATGACGTTTCATCATCGTCATCGTCATCACCATCGTCTTTTGAGTTGAGGTACAAGTGTTGCTTCCTCTGGGTGGACATATCGTTTCCTGTGCTATTGGAATACTTGCTCAAGCGAGTCGACGATATGGTCGACTCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCGGACGCGGCGAACCGAACCGGGTTCGGTTTGAGGAAGGCCATCGGGGTTCCCGAGTTCGACCGGTTTTTTAAAGAGTACCCGCCCGGACAGGGGCGAGAGGGGAAGGATCCGATGCGGGAGCGTGCATACCAAGAAGCGGTGAGGGCGATTAAGGACAACACGTGTAAGTTGGCCAAGAGGCAGATAGGGAAGATCCTGCGGCTACAAAGCGCCGGGTGGGACCTTCGGAGGATCGACGCCACGGAGGCGTTTCGGGCGGTGCTGACGTCAGACTCCCACGGCGGTTCCGATGCGTGGGAGAGACAGGTGTTACAACCAAGCGTGAACATTGTGAAGCGCTTCTTGATGGAGTAG 993 0.568 MRLSFSPPHTHHCHYHYHYPIRFHHSTRMDAPTRKDKVIVIMGATGSGKSRLSVDLATLFPFSEIINSDKMQVYRGLDITTNKIPFYQRRGVPHHLLGDVEPSLPEFSPSDFRRRAADTIADITRRKKLPILVGGSNSFVHALLVQRFDPEFNVFDDVSSSSSSSPSSFELRYKCCFLWVDISFPVLLEYLLKRVDDMVDSGMVDELAQFFDPDAANRTGFGLRKAIGVPEFDRFFKEYPPGQGREGKDPMRERAYQEAVRAIKDNTCKLAKRQIGKILRLQSAGWDLRRIDATEAFRAVLTSDSHGGSDAWERQVLQPSVNIVKRFLME* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2560 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 184 288 - -
Apr8g2560 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 214 IPR027417 -
Apr8g2560 330 Pfam IPP transferase 72 146 - -
Apr8g2560 330 Pfam IPP transferase 168 275 - -
Apr8g2560 330 Gene3D - 35 328 IPR027417 -
Apr8g2560 330 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 30 329 - -
Apr8g2560 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 30 329 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2560 Apr-Chr8 35525012 35526004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2560 41 218 C2H2 Transcription Factor Family AT2G27760 39.888 6.63e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2560 K10760 - gmx:100813761 459.914