Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2550 ATGGAAGACGAAGTGATGCATGAAGACGTAGCAGACTCAACCACCAAGGCCACTTCCACTTCCACTTCCACTTCCCCATCTCGCTCGCCAGACTCCGCCGGTGCCGGACCTCCTTCCTCCGGTGACCGGAAATACGAGTGCCAGTACTGTTGCAGAGAGTTCGCAAATTCACAAGCACTTGGTGGGCACCAGAACGCGCACAAGAAAGAGCGTCAACAACTCAAGCGTGCGCAGTTACAAGCCACGCGAAACGCCGCCGTTTCGTTCGTGCGAAACCCAATCATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTGGCTCCGCCGGGGACCGTGGTGGTCCCGGCGGCTCCGCCCTCGTGGGTGTACGTGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTTTCACACGGTTGTGCGTTCCCGTCGGCGAATAACAGTGCTTTGAGTTGTAATAATAATGGTAACGTCACCATAACGGGTGTGAAATCAGCGGGTGCAGGGATGTTTCCCTACGTTGGCGTTGTAGGAGATTCGTCATCCCCTTTGTCAACGTTGCAGGTACAGGCCAGGGCCCACCACGCTAGGATTGATGGGCCCTCTTTGAGTAGGTTCTCCAAAGCAGACAGTGGGCCCAGTTTGGATGATGCATGGGGCTTGGACTTGCACCTTAGCCTTGCCCCAGCTGCGCCGTGA 699 0.5837 MEDEVMHEDVADSTTKATSTSTSTSPSRSPDSAGAGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPPGTVVVPAAPPSWVYVPPRAAPPPFHVSVSHGCAFPSANNSALSCNNNGNVTITGVKSAGAGMFPYVGVVGDSSSPLSTLQVQARAHHARIDGPSLSRFSKADSGPSLDDAWGLDLHLSLAPAAP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2550 232 PANTHER ZINC FINGER PROTEIN GIS3 8 232 - -
Apr8g2550 232 Gene3D Classic Zinc Finger 27 92 - -
Apr8g2550 232 PANTHER ZINC FINGER PROTEIN 5 8 232 IPR044299 GO:0010090
Apr8g2550 232 SUPERFAMILY beta-beta-alpha zinc fingers 41 72 IPR036236 -
Apr8g2550 232 MobiDBLite consensus disorder prediction 12 34 - -
Apr8g2550 232 MobiDBLite consensus disorder prediction 1 44 - -
Apr8g2550 232 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Apr8g2550 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2550 Apr-Chr8 35417092 35417790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2550 42 231 C2H2 Transcription Factor Family AT1G68360 49.751 3.11e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2550 - - gmx:100811796 361.303