Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2545 ATGCCCGCCCTTTCCATGTTCAAATCAGTAATTATCTTCGCCAGTATTCTGCTTCTCGTCTCAGCTGAGGATGGAAAGTGCCCACCATCTTTCGACTGTGGGTTTCTTGGACTCATCAAATTCCCTTTCACAAGCACACTGCGACCACACTGCGGCGTTTTGCCTATTCGTGGCTGTGAAGAACATAATGCATACGCTCCCAAAACCATCCAACTCATTAACAGCTCAACATCAACATCGTACCCTGTTCTACAGGTTGAACCTCGTACCATAAAGATCAGAGATTATTATCAACATAACAATATCCGAAACAGAAGTTGCAAAGCCTTCAGCAACAATATTACTCTTCCACACACCTCTCCTTTGGCTTCTTTCTACATCAAATATAATATCACTATCTTCAGATGCAATCACTCCCTCAATATCCCCGTTCCCAAAAATTTTTATAAATATTCGACCTGTTCTGAATACAATATCTACTATGGGCCTGCCAATACTGAAATGCCTCGGGGCTACAAGTGGCCCAGCTCTCTAGCACCATGTTCAACAGTTCAGCATGCCGTAATAGATAAGTGTAGTGACGACCCCTTTCAATGTATGTCGGGTCATACAGCTATCGAAGTACAATTATCTGAAGATTGTGAAGAGTGTCTTGGTCAAAGAAGAGGCCAATGTCAACTTGACAGTGAAGGAAAATTCTATTGCGCCAAAGGGAGTAGAAGCTGGGTTGTGAAAATGGTACTAGGACTCGTCGGACTTCTGGCTGTTACAGCTGCTCTATTACTAGTAATGATCAAAATCTTTTATACAAGAAGGAAAAAGAAAAATCCAACCAATCAACGGATTGAGATTTTTTTGGAAAGATATGGACCCCTTCAAACCAAGAGATATGGTTATTCTGAGATAAAGAAAGTGACCAACTCCTTCAGAAACAAATTAGGCCAAGGGGGTTTCGGTAGTGTTTACAAAGGACAATTACAGGATGGACGCTATGTAGCAGTGAAAGTCCTAAATGAGTTGAAAGATGATGGCGAGGACTTCATCAATGAAGTTGCAACTATCAGCAGAACTTCTCATATTAACATCGTTTCTCTTCTGGGCTTCTGTTTCGAAGGCTCTAAACGAGCTTTAGTTTATGAGTTCATGTCTAATGGATCACTTGAGAAGTTTATCTTTGAAGGAAGTGTCCTAATGACAGATTGTCAGTTAGACTGCCAAATGTTGTACCATATTGCAATTGGTGTTGCTCGAGGACTAGAATATCTGCATAAAGGCTGCAACACTAGAATTTTGCATTTTGACATAAAACCTCACAACATTCTCTTGGATGAGAATTTCAACCCCAAGATTTCAGATTTTGGACTTGCAAAAATTTGTACAAGAAAAGAAAGTGCTATATCAATATTTGGCGCTAGAGGAACTGCAGGCTACATTGCCCCAGAGGTGTTTTCAAGGAATTTTGGTACAGTATCACATAAGTCTGATGTTTACAGTTATGGAATGATGATCTTAGACATGGTGGGTACGAGAAAGAATGTTAAGGCTCAAGTAGACCATTCGAGCGAAATATATTTTCCTCATTGGATTTACAAGCATCTTGAATCCAATCAAGAGCTTGGTCTACGAATTATAAGAAATGAAAATGATAGTGAAAAGGTGAGAAAAATGACAATGGTGGGTCTATGGTGCATACAAACCGATCCTTCGACTCGACCAAACATTACTAAAGTGGTAGAAATGTTAGAAGGTACAGTTGAATTGTTACCAATGCCACCTAAACCTTTTTTATCTTCTCCTTCAGCATTTCCGGTTGATTCATCGTCTGAATCAAGCATTGTAGCTTGTCACTCATGA 1854 0.3997 MPALSMFKSVIIFASILLLVSAEDGKCPPSFDCGFLGLIKFPFTSTLRPHCGVLPIRGCEEHNAYAPKTIQLINSSTSTSYPVLQVEPRTIKIRDYYQHNNIRNRSCKAFSNNITLPHTSPLASFYIKYNITIFRCNHSLNIPVPKNFYKYSTCSEYNIYYGPANTEMPRGYKWPSSLAPCSTVQHAVIDKCSDDPFQCMSGHTAIEVQLSEDCEECLGQRRGQCQLDSEGKFYCAKGSRSWVVKMVLGLVGLLAVTAALLLVMIKIFYTRRKKKNPTNQRIEIFLERYGPLQTKRYGYSEIKKVTNSFRNKLGQGGFGSVYKGQLQDGRYVAVKVLNELKDDGEDFINEVATISRTSHINIVSLLGFCFEGSKRALVYEFMSNGSLEKFIFEGSVLMTDCQLDCQMLYHIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESAISIFGARGTAGYIAPEVFSRNFGTVSHKSDVYSYGMMILDMVGTRKNVKAQVDHSSEIYFPHWIYKHLESNQELGLRIIRNENDSEKVRKMTMVGLWCIQTDPSTRPNITKVVEMLEGTVELLPMPPKPFLSSPSAFPVDSSSESSIVACHS* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2545 617 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 608 - -
Apr8g2545 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Apr8g2545 617 SMART serkin_6 307 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2545 617 ProSiteProfiles Protein kinase domain profile. 307 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2545 617 SUPERFAMILY Protein kinase-like (PK-like) 286 582 IPR011009 -
Apr8g2545 617 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 608 IPR045874 GO:0004672
Apr8g2545 617 Gene3D Phosphorylase Kinase; domain 1 286 381 - -
Apr8g2545 617 Pfam Protein kinase domain 311 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2545 617 Gene3D Transferase(Phosphotransferase) domain 1 382 593 - -
Apr8g2545 617 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2545 Apr-Chr8 35377956 35380350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2545 10 594 Receptor kinase-like Gene Family AT5G38260 39.297 4.43e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr8g2545 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2545 - - gmx:100786495 723.005