Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2544 ATGAACCATATCAGCCTCTTATTTATCCTCTATTCTCCCTTCATTCATTCCTACATCCTCCTCTTCTATCTCCTCTTCATTACAATTACTTCCTACGCTGCAGATCCAAAATTCGATGCATGTCAACCCAAAATCTGTGGCAATAACCAAATTATAAGCTACCCGTTTTACATCGAAGGAGCACAGGAATCCTTCTGTGGGTACCCTGGTTTTGGCATCTCGTGTGATCCAAATGGCTTCCCAATTCTCAGTTTCTCTGATACCCAATACACCATCCACCAAATATTCTACCAAAATCAGTCACTATTAGTGTCCAATCCCGTGTTTTCAACCTTAAGACCAAACATCAGTCAAGGTTGTCTTCAACGTACCCAGAACCTCACTCTTCCCAATAACACATTCCATCTTGCTCCGAACCAAAAGGACGTGACATTGTTCTACGGTTGTGACTTACCGTCGCTTCCCAGAGAGCTGCAAGAGCACAAAATTGGGTGTTATGTAGAAAACGGAACGAGTTCGGTTCTGGCAATGTATAAGGAGGATAAAAATATAAGCTTAGTATCAAATAATTGCACGGGTGGGGTGGCGGATGCGACGGTGGAAGATGGAATAGGAGAGATTGAAGAGGCGCTGAGAAAAGGGTTCTTCTTACAGTGGACGGCAAGTGATTGCAGCGTGTGCAGCAGTACTGGAGGGAGGTGCGGATTCGATGCTGATATGTACAGTTTCAGGTGCTTTTGTACTGAGGGAGTTCATTCTGTCAAATGTGCTGAAGGGAGTAGAACTAGAAGCTGGGTTGTGAAAGTGGAACTAGGACTCGGACTTGCTGTTACAGTTGCTCTATTACTAGTAATGGTCAGAATCTACTATACAAGATGGAAAAAGAAAAATCCAACCAATCAACGGATCGAGGTTTTTCTTAAAAGATATGGACCTCTTCAAATCAAGAAATTTGGTTATTCTGAGATAAAGAAAGTGACCAACTCCTTCAAAAACAAATTAGGCCAAGGGGGGTTTGGTAGTGTTTACAAAGGACAATTACAGGATGGACGTTACGTTGCAGTGAAGGTTCTAAGTGAATTGAAAGATGATGGTGAGGACTTCATCAATGAAGTTGCAACTATCAGCAGAACTTCTCATATTAACATCGTTTCTCTTCTGGGCTTCTGTTTCGAAGGCTCTAAACGAGCTTTAGTTTATGAGTTCATGTCTAATGGATCACTTGAGAAGTTTATCTTCGAAGGAAGTGTCCTAATGACAGATTGTCAGTTAGACTGCCAAATGTTGTACCATATTGCAATTGGTGTTGCTCGAGGACTAGAATATCTGCATAAAGGCTGCAACACTAGAATTTTGCATTTTGACATAAAACCTCACAACATTCTCTTGGATGAGAATTTCAACCCCAAGATTTCAGATTTTGGACTTGCAAAAATTTGTACAAGAAAAGAAAGTGCTGTATCAATATTTGGCGCTAGAGGAACTGCAGGCTACATTGCCCCCGAGGTGTTTTCAAGGAATTTTGGTACAGTATCACATAAGTCTGATGTTTACAGTTATGGAATGATGATCTTAGACATGGTGGGTACGAGAAAGAATGTTAAGGCTCAAGTAGACCATTCGAGCGAAATATATTTTCCTCATTGGATTTACAAGCATCTTGAATCCAATCAAGAGCTTGGTCTACGAATTATAAGAAATGAAAATGATAGTGAAAAGGTGAGAAAAATGACAATGGTGGGTCTATGGTGCATCCAAACAGATCCTTCGACTCGACCAAACATTACTAAAGTGGTCGAAATGTTAGAAGGTACAGTTGAATTGTTACCAATGCCACCTAAACCTTTTTTATCTCCTTCAACCTTTCCGGTTGATTCATCGTGTGAATCAAGCATTGTAGCTTCTCACTCGTGA 1914 0.408 MNHISLLFILYSPFIHSYILLFYLLFITITSYAADPKFDACQPKICGNNQIISYPFYIEGAQESFCGYPGFGISCDPNGFPILSFSDTQYTIHQIFYQNQSLLVSNPVFSTLRPNISQGCLQRTQNLTLPNNTFHLAPNQKDVTLFYGCDLPSLPRELQEHKIGCYVENGTSSVLAMYKEDKNISLVSNNCTGGVADATVEDGIGEIEEALRKGFFLQWTASDCSVCSSTGGRCGFDADMYSFRCFCTEGVHSVKCAEGSRTRSWVVKVELGLGLAVTVALLLVMVRIYYTRWKKKNPTNQRIEVFLKRYGPLQIKKFGYSEIKKVTNSFKNKLGQGGFGSVYKGQLQDGRYVAVKVLSELKDDGEDFINEVATISRTSHINIVSLLGFCFEGSKRALVYEFMSNGSLEKFIFEGSVLMTDCQLDCQMLYHIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESAVSIFGARGTAGYIAPEVFSRNFGTVSHKSDVYSYGMMILDMVGTRKNVKAQVDHSSEIYFPHWIYKHLESNQELGLRIIRNENDSEKVRKMTMVGLWCIQTDPSTRPNITKVVEMLEGTVELLPMPPKPFLSPSTFPVDSSCESSIVASHS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2544 637 ProSiteProfiles Protein kinase domain profile. 328 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2544 637 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Apr8g2544 637 SMART serkin_6 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2544 637 Gene3D Phosphorylase Kinase; domain 1 306 402 - -
Apr8g2544 637 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 17 625 - -
Apr8g2544 637 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Apr8g2544 637 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Apr8g2544 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Apr8g2544 637 Pfam Protein kinase domain 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2544 637 SUPERFAMILY Protein kinase-like (PK-like) 307 603 IPR011009 -
Apr8g2544 637 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 625 IPR045874 GO:0004672
Apr8g2544 637 Pfam Wall-associated receptor kinase C-terminal 184 249 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2544 Apr-Chr8 35365270 35374320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2544 10 624 Receptor kinase-like Gene Family AT5G38260 39.185 1.46e-144 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr8g2544 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2544 - - ahf:112712060 786.949