Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2544 | ATGAACCATATCAGCCTCTTATTTATCCTCTATTCTCCCTTCATTCATTCCTACATCCTCCTCTTCTATCTCCTCTTCATTACAATTACTTCCTACGCTGCAGATCCAAAATTCGATGCATGTCAACCCAAAATCTGTGGCAATAACCAAATTATAAGCTACCCGTTTTACATCGAAGGAGCACAGGAATCCTTCTGTGGGTACCCTGGTTTTGGCATCTCGTGTGATCCAAATGGCTTCCCAATTCTCAGTTTCTCTGATACCCAATACACCATCCACCAAATATTCTACCAAAATCAGTCACTATTAGTGTCCAATCCCGTGTTTTCAACCTTAAGACCAAACATCAGTCAAGGTTGTCTTCAACGTACCCAGAACCTCACTCTTCCCAATAACACATTCCATCTTGCTCCGAACCAAAAGGACGTGACATTGTTCTACGGTTGTGACTTACCGTCGCTTCCCAGAGAGCTGCAAGAGCACAAAATTGGGTGTTATGTAGAAAACGGAACGAGTTCGGTTCTGGCAATGTATAAGGAGGATAAAAATATAAGCTTAGTATCAAATAATTGCACGGGTGGGGTGGCGGATGCGACGGTGGAAGATGGAATAGGAGAGATTGAAGAGGCGCTGAGAAAAGGGTTCTTCTTACAGTGGACGGCAAGTGATTGCAGCGTGTGCAGCAGTACTGGAGGGAGGTGCGGATTCGATGCTGATATGTACAGTTTCAGGTGCTTTTGTACTGAGGGAGTTCATTCTGTCAAATGTGCTGAAGGGAGTAGAACTAGAAGCTGGGTTGTGAAAGTGGAACTAGGACTCGGACTTGCTGTTACAGTTGCTCTATTACTAGTAATGGTCAGAATCTACTATACAAGATGGAAAAAGAAAAATCCAACCAATCAACGGATCGAGGTTTTTCTTAAAAGATATGGACCTCTTCAAATCAAGAAATTTGGTTATTCTGAGATAAAGAAAGTGACCAACTCCTTCAAAAACAAATTAGGCCAAGGGGGGTTTGGTAGTGTTTACAAAGGACAATTACAGGATGGACGTTACGTTGCAGTGAAGGTTCTAAGTGAATTGAAAGATGATGGTGAGGACTTCATCAATGAAGTTGCAACTATCAGCAGAACTTCTCATATTAACATCGTTTCTCTTCTGGGCTTCTGTTTCGAAGGCTCTAAACGAGCTTTAGTTTATGAGTTCATGTCTAATGGATCACTTGAGAAGTTTATCTTCGAAGGAAGTGTCCTAATGACAGATTGTCAGTTAGACTGCCAAATGTTGTACCATATTGCAATTGGTGTTGCTCGAGGACTAGAATATCTGCATAAAGGCTGCAACACTAGAATTTTGCATTTTGACATAAAACCTCACAACATTCTCTTGGATGAGAATTTCAACCCCAAGATTTCAGATTTTGGACTTGCAAAAATTTGTACAAGAAAAGAAAGTGCTGTATCAATATTTGGCGCTAGAGGAACTGCAGGCTACATTGCCCCCGAGGTGTTTTCAAGGAATTTTGGTACAGTATCACATAAGTCTGATGTTTACAGTTATGGAATGATGATCTTAGACATGGTGGGTACGAGAAAGAATGTTAAGGCTCAAGTAGACCATTCGAGCGAAATATATTTTCCTCATTGGATTTACAAGCATCTTGAATCCAATCAAGAGCTTGGTCTACGAATTATAAGAAATGAAAATGATAGTGAAAAGGTGAGAAAAATGACAATGGTGGGTCTATGGTGCATCCAAACAGATCCTTCGACTCGACCAAACATTACTAAAGTGGTCGAAATGTTAGAAGGTACAGTTGAATTGTTACCAATGCCACCTAAACCTTTTTTATCTCCTTCAACCTTTCCGGTTGATTCATCGTGTGAATCAAGCATTGTAGCTTCTCACTCGTGA | 1914 | 0.408 | MNHISLLFILYSPFIHSYILLFYLLFITITSYAADPKFDACQPKICGNNQIISYPFYIEGAQESFCGYPGFGISCDPNGFPILSFSDTQYTIHQIFYQNQSLLVSNPVFSTLRPNISQGCLQRTQNLTLPNNTFHLAPNQKDVTLFYGCDLPSLPRELQEHKIGCYVENGTSSVLAMYKEDKNISLVSNNCTGGVADATVEDGIGEIEEALRKGFFLQWTASDCSVCSSTGGRCGFDADMYSFRCFCTEGVHSVKCAEGSRTRSWVVKVELGLGLAVTVALLLVMVRIYYTRWKKKNPTNQRIEVFLKRYGPLQIKKFGYSEIKKVTNSFKNKLGQGGFGSVYKGQLQDGRYVAVKVLSELKDDGEDFINEVATISRTSHINIVSLLGFCFEGSKRALVYEFMSNGSLEKFIFEGSVLMTDCQLDCQMLYHIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESAVSIFGARGTAGYIAPEVFSRNFGTVSHKSDVYSYGMMILDMVGTRKNVKAQVDHSSEIYFPHWIYKHLESNQELGLRIIRNENDSEKVRKMTMVGLWCIQTDPSTRPNITKVVEMLEGTVELLPMPPKPFLSPSTFPVDSSCESSIVASHS* | 638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2544 | 637 | ProSiteProfiles | Protein kinase domain profile. | 328 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2544 | 637 | ProSitePatterns | Protein kinases ATP-binding region signature. | 334 | 356 | IPR017441 | GO:0005524 | |
Apr8g2544 | 637 | SMART | serkin_6 | 328 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2544 | 637 | Gene3D | Phosphorylase Kinase; domain 1 | 306 | 402 | - | - | |
Apr8g2544 | 637 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 17 | 625 | - | - | |
Apr8g2544 | 637 | Pfam | Wall-associated receptor kinase galacturonan-binding | 41 | 105 | IPR025287 | GO:0030247 | |
Apr8g2544 | 637 | Gene3D | Transferase(Phosphotransferase) domain 1 | 403 | 614 | - | - | |
Apr8g2544 | 637 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 451 | 463 | IPR008271 | GO:0004672|GO:0006468 | |
Apr8g2544 | 637 | Pfam | Protein kinase domain | 331 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2544 | 637 | SUPERFAMILY | Protein kinase-like (PK-like) | 307 | 603 | IPR011009 | - | |
Apr8g2544 | 637 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 17 | 625 | IPR045874 | GO:0004672 | |
Apr8g2544 | 637 | Pfam | Wall-associated receptor kinase C-terminal | 184 | 249 | IPR032872 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2544 | Apr-Chr8 | 35365270 | 35374320 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2544 | 10 | 624 | Receptor kinase-like Gene Family | AT5G38260 | 39.185 | 1.46e-144 | 432 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Apr8g2544 | Pkinase | 3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2544 | - | - | ahf:112712060 | 786.949 |