Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2543 | ATGAGTCCAGTTTATGAATTTGTATTATTGCTTTGGTTTTCTCACCTTATGCCACTTCTCTTGGCTTCAGGGCACCAAGGAGAGTGCCCCACTTCGTTCAATTGTGGATATCTCGGCAATATCGGTTTCCCTTTTACTATAACACAACGCCCTCACTGTGGCTTATTTCCCATTCCAAATTGTGATGATCGTGATCTACATAAGCCCAAATCTATCCAACTAGACAATCAACGAAAACCGTTTTTGCTTTTTCAAGTTCTTCCGCGTATTTCTGATACTACTACAACTTTGCATTTAAGAGACAACACTCTCTATGAACTTCTTCAAAACAGAAGTTGTGAAGCTTTCACAAACAATTATACTCTTCCTCGCGCCTCTCAATTTGCTGCTTTTAGTCTACAATACAGTGCAACCCTGTTCAGGTGCAACCGTACCCGCCATGTCAAACCTGCAACAAAAATGAAAAATTATAAGTGTGATGACCGTGACTACGATCTCTACTACGGGCCTGAATTGACCGCCGATGATCCGTCTTTGAGTTCTTCCATTGCATGTACAAAGGTGCTCCTTCCAATTAAAGATGTGCCAGATGCTGAAGACCCATTTACTTTCGTAGCTTCTGATTTGTTCATGGAAGTAAAATTAACTATTGAATGTGTAAATTGTCACTATCAACGAGGGGGGCAGTGTCAACTTGACAGCAAACAGAGTTTCTACTGTGCCATCAGTTACGAGAAAACCAGAAAGAAGATTGTGGTAACAGCTTTGACCTTGGTGGCTGCGGGAGTTGTAGTGCTGATGATCTTGGCTTGCTGCTTTAGGACAAAGATTTCCTCTCCCGCGTATCTTTTGTATTGGAGGAAGAATCGAACCCATGCAATTATTGAAGAGTTTTTGAAGGAACATGGACCTCTTCCTACGGGTAGGTACAGTTATTCAGAGGTTAAGAAAATGACCAACTCTTTCAAAAATAAATTAGGCCAAGGAGGTTACGGGTGTGTATTCAAAGGGAAGTTACATGATGGATGCCTTGTTGCTGTGAAGATTTTAAGCAAATCAGAAGATAATGGAGAAGAATTCATTAACGAAGTTGCAAGTATTAGTAGGACTTCACATGTTAACATTGTTAGACTTTTGGGATTCTGTTTCGACGGTTCTAAAAGGGCTTTAATATACGAGTTTATGCCAAATGGATCACTTGAGAAGTTCATATATGAAGAGAAGAATCCACTACAGGTTGCTCGCCAATTGGACTGCAACACATTGTATGATATTGCAATTGGCGTTGCTCGTGGATTAGAATACTTGCACAGAGGTTGTAACACTAGAATTTTGCATTTTGACATAAAACCTCACAACATATTACTAGATGAGGATTTTTGTCCAAAAATTTCAGATTTTGGACTTGCAAAAATATGCCCAAGAAAAGAAAGTTCAGTATCGATGTTTGGTACCAGAGGAACTGTAGGCTATATTGCCCCAGAGGTTTTTTCAAGAAATTTTGGTGCAGTATCACACAAGTCAGATGTTTACAGTTTCGGAATGATGGTCTTAGAAATGGTTGGGATAAGAAAGAATATTAAGCCTGAAGTAGACCACTCTAGTGAAATATATTTTCCTCATTGGATTTACAATCGTCTCGAATCAAATCAAGAGCTTTGTCTGCTGAGTATAAGAAATGAAAGTGATAACGAAAAGGCAAGAAAAATGACAATAGTGGGCTTATGGTGCATACAAACTATCCCTTCAAATCGACCAACCATAAGTAAAGTGCTGGAAATGTTAGAAGGTAGAGTTGAGTTGTTGCAAATGCCACCTAAACCCTTTTTTTCTCCTTCATCCTCCCCAGTCCATTTGTCATGTGAGACAGTTTGTGTGAATACTAAGATTTAG | 1893 | 0.393 | MSPVYEFVLLLWFSHLMPLLLASGHQGECPTSFNCGYLGNIGFPFTITQRPHCGLFPIPNCDDRDLHKPKSIQLDNQRKPFLLFQVLPRISDTTTTLHLRDNTLYELLQNRSCEAFTNNYTLPRASQFAAFSLQYSATLFRCNRTRHVKPATKMKNYKCDDRDYDLYYGPELTADDPSLSSSIACTKVLLPIKDVPDAEDPFTFVASDLFMEVKLTIECVNCHYQRGGQCQLDSKQSFYCAISYEKTRKKIVVTALTLVAAGVVVLMILACCFRTKISSPAYLLYWRKNRTHAIIEEFLKEHGPLPTGRYSYSEVKKMTNSFKNKLGQGGYGCVFKGKLHDGCLVAVKILSKSEDNGEEFINEVASISRTSHVNIVRLLGFCFDGSKRALIYEFMPNGSLEKFIYEEKNPLQVARQLDCNTLYDIAIGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESSVSMFGTRGTVGYIAPEVFSRNFGAVSHKSDVYSFGMMVLEMVGIRKNIKPEVDHSSEIYFPHWIYNRLESNQELCLLSIRNESDNEKARKMTIVGLWCIQTIPSNRPTISKVLEMLEGRVELLQMPPKPFFSPSSSPVHLSCETVCVNTKI* | 631 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2543 | 630 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 444 | 456 | IPR008271 | GO:0004672|GO:0006468 | |
Apr8g2543 | 630 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 394 | - | - | |
Apr8g2543 | 630 | ProSitePatterns | Protein kinases ATP-binding region signature. | 326 | 348 | IPR017441 | GO:0005524 | |
Apr8g2543 | 630 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 622 | IPR045874 | GO:0004672 | |
Apr8g2543 | 630 | ProSiteProfiles | Protein kinase domain profile. | 320 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2543 | 630 | SMART | serkin_6 | 320 | 595 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2543 | 630 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 1 | 622 | - | - | |
Apr8g2543 | 630 | SUPERFAMILY | Protein kinase-like (PK-like) | 304 | 596 | IPR011009 | - | |
Apr8g2543 | 630 | Pfam | Protein kinase domain | 323 | 593 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2543 | 630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 395 | 603 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2543 | Apr-Chr8 | 35361317 | 35363899 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2543 | 5 | 610 | Receptor kinase-like Gene Family | AT1G66910 | 38.462 | 1.79e-126 | 386 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Apr8g2543 | Pkinase | 2.4e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2543 | - | - | gmx:100783861 | 805.823 |