Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2543 ATGAGTCCAGTTTATGAATTTGTATTATTGCTTTGGTTTTCTCACCTTATGCCACTTCTCTTGGCTTCAGGGCACCAAGGAGAGTGCCCCACTTCGTTCAATTGTGGATATCTCGGCAATATCGGTTTCCCTTTTACTATAACACAACGCCCTCACTGTGGCTTATTTCCCATTCCAAATTGTGATGATCGTGATCTACATAAGCCCAAATCTATCCAACTAGACAATCAACGAAAACCGTTTTTGCTTTTTCAAGTTCTTCCGCGTATTTCTGATACTACTACAACTTTGCATTTAAGAGACAACACTCTCTATGAACTTCTTCAAAACAGAAGTTGTGAAGCTTTCACAAACAATTATACTCTTCCTCGCGCCTCTCAATTTGCTGCTTTTAGTCTACAATACAGTGCAACCCTGTTCAGGTGCAACCGTACCCGCCATGTCAAACCTGCAACAAAAATGAAAAATTATAAGTGTGATGACCGTGACTACGATCTCTACTACGGGCCTGAATTGACCGCCGATGATCCGTCTTTGAGTTCTTCCATTGCATGTACAAAGGTGCTCCTTCCAATTAAAGATGTGCCAGATGCTGAAGACCCATTTACTTTCGTAGCTTCTGATTTGTTCATGGAAGTAAAATTAACTATTGAATGTGTAAATTGTCACTATCAACGAGGGGGGCAGTGTCAACTTGACAGCAAACAGAGTTTCTACTGTGCCATCAGTTACGAGAAAACCAGAAAGAAGATTGTGGTAACAGCTTTGACCTTGGTGGCTGCGGGAGTTGTAGTGCTGATGATCTTGGCTTGCTGCTTTAGGACAAAGATTTCCTCTCCCGCGTATCTTTTGTATTGGAGGAAGAATCGAACCCATGCAATTATTGAAGAGTTTTTGAAGGAACATGGACCTCTTCCTACGGGTAGGTACAGTTATTCAGAGGTTAAGAAAATGACCAACTCTTTCAAAAATAAATTAGGCCAAGGAGGTTACGGGTGTGTATTCAAAGGGAAGTTACATGATGGATGCCTTGTTGCTGTGAAGATTTTAAGCAAATCAGAAGATAATGGAGAAGAATTCATTAACGAAGTTGCAAGTATTAGTAGGACTTCACATGTTAACATTGTTAGACTTTTGGGATTCTGTTTCGACGGTTCTAAAAGGGCTTTAATATACGAGTTTATGCCAAATGGATCACTTGAGAAGTTCATATATGAAGAGAAGAATCCACTACAGGTTGCTCGCCAATTGGACTGCAACACATTGTATGATATTGCAATTGGCGTTGCTCGTGGATTAGAATACTTGCACAGAGGTTGTAACACTAGAATTTTGCATTTTGACATAAAACCTCACAACATATTACTAGATGAGGATTTTTGTCCAAAAATTTCAGATTTTGGACTTGCAAAAATATGCCCAAGAAAAGAAAGTTCAGTATCGATGTTTGGTACCAGAGGAACTGTAGGCTATATTGCCCCAGAGGTTTTTTCAAGAAATTTTGGTGCAGTATCACACAAGTCAGATGTTTACAGTTTCGGAATGATGGTCTTAGAAATGGTTGGGATAAGAAAGAATATTAAGCCTGAAGTAGACCACTCTAGTGAAATATATTTTCCTCATTGGATTTACAATCGTCTCGAATCAAATCAAGAGCTTTGTCTGCTGAGTATAAGAAATGAAAGTGATAACGAAAAGGCAAGAAAAATGACAATAGTGGGCTTATGGTGCATACAAACTATCCCTTCAAATCGACCAACCATAAGTAAAGTGCTGGAAATGTTAGAAGGTAGAGTTGAGTTGTTGCAAATGCCACCTAAACCCTTTTTTTCTCCTTCATCCTCCCCAGTCCATTTGTCATGTGAGACAGTTTGTGTGAATACTAAGATTTAG 1893 0.393 MSPVYEFVLLLWFSHLMPLLLASGHQGECPTSFNCGYLGNIGFPFTITQRPHCGLFPIPNCDDRDLHKPKSIQLDNQRKPFLLFQVLPRISDTTTTLHLRDNTLYELLQNRSCEAFTNNYTLPRASQFAAFSLQYSATLFRCNRTRHVKPATKMKNYKCDDRDYDLYYGPELTADDPSLSSSIACTKVLLPIKDVPDAEDPFTFVASDLFMEVKLTIECVNCHYQRGGQCQLDSKQSFYCAISYEKTRKKIVVTALTLVAAGVVVLMILACCFRTKISSPAYLLYWRKNRTHAIIEEFLKEHGPLPTGRYSYSEVKKMTNSFKNKLGQGGYGCVFKGKLHDGCLVAVKILSKSEDNGEEFINEVASISRTSHVNIVRLLGFCFDGSKRALIYEFMPNGSLEKFIYEEKNPLQVARQLDCNTLYDIAIGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESSVSMFGTRGTVGYIAPEVFSRNFGAVSHKSDVYSFGMMVLEMVGIRKNIKPEVDHSSEIYFPHWIYNRLESNQELCLLSIRNESDNEKARKMTIVGLWCIQTIPSNRPTISKVLEMLEGRVELLQMPPKPFFSPSSSPVHLSCETVCVNTKI* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2543 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Apr8g2543 630 Gene3D Phosphorylase Kinase; domain 1 299 394 - -
Apr8g2543 630 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Apr8g2543 630 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 622 IPR045874 GO:0004672
Apr8g2543 630 ProSiteProfiles Protein kinase domain profile. 320 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2543 630 SMART serkin_6 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2543 630 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 622 - -
Apr8g2543 630 SUPERFAMILY Protein kinase-like (PK-like) 304 596 IPR011009 -
Apr8g2543 630 Pfam Protein kinase domain 323 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2543 630 Gene3D Transferase(Phosphotransferase) domain 1 395 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2543 Apr-Chr8 35361317 35363899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2543 5 610 Receptor kinase-like Gene Family AT1G66910 38.462 1.79e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr8g2543 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2543 - - gmx:100783861 805.823