Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2542 ATGGCCTCTAGTCAAGGGAGGCGGCATCACCATGATCTTGTGCCTCTTGCTGCATTGCTGAAGAGAGAGATGAAGAGTGAGAAGATGGAGAAACCCACCGTGAGGTTTGGGCATGCTGCTCAGTCCAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCAGCGAGTGCCTGGGAACTCTTCATCATCCTTTTCTGTATTTGCGATCTTTGATGGGCACAATGGAAATGCTGCTGCCATTTTTACCAGGGAGCATTTGTTAAATCATGTGCTGGGTGCTCTCCCTCGCGGGCTTGGACGAGATGAGTGGATACAAGCTTTACCTAGGGCGTTGGTTGCTGGGTTTGTTAAGACTGATAAGGAATTCCAGAGCAGAGGGGAAACTTCTGGAACCACAGCTACGTTTGTAATAGTGGATAGATGGACTGTGACTGTTGCATCTGTTGGAGATTCCCGTTGTATACTGGATACCCAGGGTGGTGCTGTTACCACCTTAACTGTTGATCACAGACTTGAAGAAAATATTGAAGAGAGGGAACGTGTAACTGCTAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCCCTTCGATGCTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTCATAGTTCCGATACCATATGTCAAACAAGTGAAGCTATCAAATGTTGGCGGGAGGCTTATAATTGCTTCTGATGGAATATGGGATGCTCTATCCTCAGAAATGGCTGCAAAATCTTGCCGAGGTTTGCCTGCAGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACAAGGGGGTTAAAGGATGATACGACTTGCATAGTTGTTGACATAATCCCACCTGATAATGAGTTGCCACCAACACCTCCCCCAAAAAAGCGGAACAAGCTGAGAGACCTTCTGTTCAGGAAGAGGTCCCGGGATTCTGCCGGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTCGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTTGAACTCAGGACAATCAACATCTGGGCTTTTTGTCTGTGCTGTATGCCAAGTTGATCTTGCTCCAAGTGAAGGCATCTCTGTCCACGCAGGTTCCATCTTCTCCACCAGTGCAAAACCCTGGCAAGGTCCTTTCCTATGTTCTGATTGTCGCGATAAGAAGGATGCTATGGAAGGAAAACGTCCCAGCGGAGTTAAAGTATCATAG 1293 0.4679 MASSQGRRHHHDLVPLAALLKREMKSEKMEKPTVRFGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWIQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNVGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKRNKLRDLLFRKRSRDSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSAKPWQGPFLCSDCRDKKDAMEGKRPSGVKVS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2542 430 Gene3D - 34 301 IPR036457 -
Apr8g2542 430 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Apr8g2542 430 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 429 - -
Apr8g2542 430 SMART PP2C_SIG_2 51 297 IPR001932 -
Apr8g2542 430 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Apr8g2542 430 CDD PP2Cc 36 297 IPR001932 -
Apr8g2542 430 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Apr8g2542 430 SMART PP2C_4 27 295 IPR001932 -
Apr8g2542 430 PANTHER ALPHABET, ISOFORM E-RELATED 2 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2542 Apr-Chr8 35353025 35358246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2542 1 429 PP2C-type Phosphatase Gene Family AT1G68410 79.587 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2542 - - gmx:100779571 803.127