Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2541 ATGCACAGGACAAGGCTTATTGAAAAGACTTGTGAAATAATTTTCCTAGTCAATTGGCGTATCAATTGGTTCCAAATATTTTTATATGCTGTGAAGAAGTGGGAGTTACAACTTGCGAAGAAAATAATGGGAGGTTTTGATGACGTGAGAGTGAGGGGTTTGAGGGTGTCTGAGGTTTATGTTTTGTTTTGTGGTCTAACAGTGCTTCGTCTCCCAGCCACTGGGAGCCATGAAGCTTGTCCACACTTATTTGATTGTGGAAATCTTGGGACGATTGGATTCCCTTTTACCACAATAGAACGCAAGGAGTGTGGTGCTTTAGCAATCTATGGTTGTGATGATAGTAACCAAACAGCAGAGAAGCATGTGCGGTTGAACAATGGAGGAAAACGGTTCCAAGTTACAAAAGTTGAGCAGAGGTGGAGGTGGTGGTATAGTATTTCTATTATTGACCATGATTTCAGGGAGGTTTTGCAAAATGCTAGTTGTAATTGTAAGGCCTTCAGCTATAATATTACTCTCCCTCCCCACTCTTCTTTTGGTTCATTTTATATAGAAAAAAATATAACCGCATTCCAATGCAACAAAAGTAAAACCCTTAAAATGATCCCTTCAAATTTCTTCAAAAATAAAACCTGTTCTGAATTTGATATTTACTTCGGCCCTTCAAACTCTGACGATGCCTCCCTGCATTCTTTAGTGTCCACATGTTCAACGCATTACTTTCCGGTTGGTGAAGGTTTTGTGTTATCAGGAAACCCATGGCCATATTTTACTCCTAAATTTACCATTCAATTCTCCCCTTCAGATTATTGTAACCGGTGCCACCACAGTGCTGGCCATTGCCAACTTGACAACAAGAGTAAAGTTTATTGTGCCACAAGGAGGAGGAGTGGAACTTGGAAACTAGGATTGGGGCTAGGTGACGTACAGACACACTTTACAGGGCTCGGAATTGGAGCATCGATGGTATTTGGATTGATCCTCTTATGGCGTTGCAAACGAAAACATGGTCGTGGTCGTGCACAAGGCCAATTACATTCCACAAACGCTTATGCTGATCCCCACTCAGAGACGGAGAGGATCTTCTTTGGGGTACCCGTCTTCTCTTATAAGGACCTTCAAGAAGCAACCAACAATTTTGACCTCACTAGAAAGCTTGGAGATGGAGGCTTTGGCACTGTTTACTATGGGAAACTCGGAGATGGAAGGGAAGTTGCAATCAAACACCTATTTGAGCACAATTACAGGAGAGTGGAACAATTTATGAATGAAATTGAGATCCTCACTCGCTTGCGCCATAAAAATCTCGTGTCCCTCTATGGCTGCACTTCACGTCACAGCCATGAGCTATTGCTTGTATATGAATACATTCCAAATGGCACAGTTGCTAGCCATCTCCACGGTAATTTATCAAGGGTTGGTGTGTTGACATGGCCTATTCGAATGCAAATTGCCATTGACACTGCTACTGCATTGGCCTATCTCCATGCTTCTAACATCATTCACCGTGATGTCAAAACCAACAACATTCTGCTTGACATCAATTTTTCAGTTAAAGTAGCAGACTTTGGGCTTTCAAGATTGCTCCCCAACGATGCCACCCATGTCTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGACCCTGAATATTTCCAATGCTACCAGCTCACAGACAAGAGTGACGTGTATAGCTTTGGGGTTGTTCTTATTGAGCTTATATCATCTATGCCTGCAGTTGATGCAGCCAGGGAAAGGGATGAAGTTAAATTGGCAAATCTAGCTTCAAAGAAGATTCAAAAAGGGAAACTTTGTGAGCTGGTAGACCCATCCCTTGGTTTTGAGTTGGACCATCAAGTTACAAGGATGCTAACTTCAGTGGCAGAACTGGCTATTCAGTGTGTGCAAGGGGACAGGGAATTGAGGCCTTCTATGGATGAAGTTGTGGAGGCACTTCAGAAATTTGGAAGTGGGAAATATGAGCGTGAGGATCTAGTGCTAAGAGATGAAAGTGCTGGGATCTCTTCTGGTGAAGAAGTGCATCTACCATCATCAGCCTCACAGGACTCAGGTCAAGTTGGATATTTCATGAACCAAAAGCTACCAGCTTCACCCAAGTCCTTGACTGAGAAATGGGAATGTGAATCTACTACGCCTAGTTCAAGGGGTTAA 2175 0.4303 MHRTRLIEKTCEIIFLVNWRINWFQIFLYAVKKWELQLAKKIMGGFDDVRVRGLRVSEVYVLFCGLTVLRLPATGSHEACPHLFDCGNLGTIGFPFTTIERKECGALAIYGCDDSNQTAEKHVRLNNGGKRFQVTKVEQRWRWWYSISIIDHDFREVLQNASCNCKAFSYNITLPPHSSFGSFYIEKNITAFQCNKSKTLKMIPSNFFKNKTCSEFDIYFGPSNSDDASLHSLVSTCSTHYFPVGEGFVLSGNPWPYFTPKFTIQFSPSDYCNRCHHSAGHCQLDNKSKVYCATRRRSGTWKLGLGLGDVQTHFTGLGIGASMVFGLILLWRCKRKHGRGRAQGQLHSTNAYADPHSETERIFFGVPVFSYKDLQEATNNFDLTRKLGDGGFGTVYYGKLGDGREVAIKHLFEHNYRRVEQFMNEIEILTRLRHKNLVSLYGCTSRHSHELLLVYEYIPNGTVASHLHGNLSRVGVLTWPIRMQIAIDTATALAYLHASNIIHRDVKTNNILLDINFSVKVADFGLSRLLPNDATHVSTAPQGSPGYLDPEYFQCYQLTDKSDVYSFGVVLIELISSMPAVDAARERDEVKLANLASKKIQKGKLCELVDPSLGFELDHQVTRMLTSVAELAIQCVQGDRELRPSMDEVVEALQKFGSGKYEREDLVLRDESAGISSGEEVHLPSSASQDSGQVGYFMNQKLPASPKSLTEKWECESTTPSSRG* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2541 724 ProSiteProfiles Protein kinase domain profile. 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2541 724 CDD STKc_IRAK 387 656 - -
Apr8g2541 724 Gene3D Phosphorylase Kinase; domain 1 353 457 - -
Apr8g2541 724 SUPERFAMILY Protein kinase-like (PK-like) 364 654 IPR011009 -
Apr8g2541 724 MobiDBLite consensus disorder prediction 677 724 - -
Apr8g2541 724 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 74 721 - -
Apr8g2541 724 Pfam Protein tyrosine and serine/threonine kinase 383 653 IPR001245 GO:0004672|GO:0006468
Apr8g2541 724 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Apr8g2541 724 MobiDBLite consensus disorder prediction 679 724 - -
Apr8g2541 724 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 74 721 IPR044652 -
Apr8g2541 724 SMART serkin_6 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2541 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Apr8g2541 724 Gene3D Transferase(Phosphotransferase) domain 1 458 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2541 Apr-Chr8 35338047 35341953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2541 84 722 Receptor kinase-like Gene Family AT1G25390 44.512 2.28e-159 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr8g2541 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2541 - - aprc:113871895 1493.79