Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2540 ATGTTTCAAGTTGACATGCTTTGGATGACGCTTGTCATTCTGTGGGCTGGAATTGGAAATGGGGACCATGAAGATTGTCCACCCTATTTTGATTGTGGAAGCCATGGGAGGTTTGGCTACCCTTTCACCAAGGTAGAACGCCCAGATTGTGGTATATGGTCAATCCATGGTTGCGATGATCATAATCCAAATTCAGGGCAAAATGTCATATTAAGTTTTGGAACAACCTCGATTAAGGTTAGAAAATTTGAGTTGGATTTTGTCACTACTACAGTTTACTTTATTGATGAAGATCTCAACAAACTTTTGCTATCAGAAAGTTGTGAAACCTTCAGCCATAATGTTACACTTCCACCCAGTTCTCCCTTGGGTTATTATACCTTACTTAATAATATAACACTGTTCAAATGCAACCGCATCCTCAAAGTCAACCCTCCAAAAACTTTCCTCAAAAATACAAGCTGTGGCTATGATATCTTCATAGGCCCTCCACACTCTGATGACGTGTCTCAGCGCTCTCTAGCAGTTTGTTCAATGGTTCAGCTTCCCATTAATGGCTTTGCAATCTCTGCAAACCCATTTGCATTCTTAACTGCTGAGATTCCCATGCAGTTCCTTCCCTCAGATGAGTGTTTGCTGTGTCTTCATCATAGAGGCCAATGTCGACTTGCCAGCCAAGGAAAAGTTTATTGCGCCCAAAGGAAGGATAAAAGAAATTCGGATTGGAAGCCAGGATGGGTATTAGGTAACGTAATATATTCAACCATGGCAGGTATAGGTGTTATTGCTCCATGGATAATAATAATGTTTGGGTTATTCTTCGCATTACGGCACTGTAAACGGAAATATGGTTCCGCACAAGGTCCATTCCAATCAAGAAACACTCCAGTTGATCCCTACGAAAATCCAGACACAGAGACGGAGAGGATCTTCTTTGGTGTACCCGTCTTCTCCTATAAGGAGCTTCAAGAAGCAACCAGCAATTTTGACCTCACTAGAAAGCTTGGAGATGGAGGCTTCGGCAGCGTTTACTATGGAAAACTCCAAGATGGAAGGGAAGTTGCAGTGAAATACTTGTTCGAGAACAATTACAGGAGAGTGCAACAGTTTATGAATGAAATTGAGATTCTCACTCGTCTGCGCCACAGAAATCTCGTGTCCCTCTATGGCTGCACCTCACGCCACAGCCGCGAGCTACTTCTTGTCTACGAATATGTCCCTAATGGCACACTTGCCTACCATCTACATGGCGATTTTGGAAGAGCTAGTTCGCTGACATGGCCAATTCGAATGCGAATTGCGATTGAGACGGCAACAGCATTGGCTTATCTCCATGCTTCCGACATCATTCACCGTGATGTCAAAACCAACAACATTCTACTTGACATTAGTTTTTCAGTTAAAGTAGCAGATTTTGGGCTTTCAAGGTTGCTCCCCAATGACGTAAGCCACGTTTCCACAGCCCCACAAGGGACACCGGGATATCTTGATCCTGAATATTTCCAATGCTACCAGCTCACAGATAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTCATTGAGTTAATATCATCTATGCCAGCTGTTGATGCAGGGAGGGAAAGGGATGAAATTAACTTGGCAAATCTAGCCATAAAGAAAATTCAGAAAGGTGAACTTGGTGAGTTGGTGGGTCCATCCCTTGGTTTTGAGTCAGACCGTGAAGTTAAAAGGATGCTAACTTCAGTGGCAGAATTGGCTTTTCAGTGTGTGCAAGGAGACAAGTTATTAAGACCTTCCATGGAACAAGTTCTTAAAACACTCGTGAGAATTGAAGGTGGGAATTATGAATATGAGGATCTAGTACAAGGAAATGATGATGGTGATGGGACCTCGCACAGTGAAGAAGTAATGTTTTTCACTACCCGCGGGACTGAGGTTAGGGTAGATTTGTTATGA 1938 0.4298 MFQVDMLWMTLVILWAGIGNGDHEDCPPYFDCGSHGRFGYPFTKVERPDCGIWSIHGCDDHNPNSGQNVILSFGTTSIKVRKFELDFVTTTVYFIDEDLNKLLLSESCETFSHNVTLPPSSPLGYYTLLNNITLFKCNRILKVNPPKTFLKNTSCGYDIFIGPPHSDDVSQRSLAVCSMVQLPINGFAISANPFAFLTAEIPMQFLPSDECLLCLHHRGQCRLASQGKVYCAQRKDKRNSDWKPGWVLGNVIYSTMAGIGVIAPWIIIMFGLFFALRHCKRKYGSAQGPFQSRNTPVDPYENPDTETERIFFGVPVFSYKELQEATSNFDLTRKLGDGGFGSVYYGKLQDGREVAVKYLFENNYRRVQQFMNEIEILTRLRHRNLVSLYGCTSRHSRELLLVYEYVPNGTLAYHLHGDFGRASSLTWPIRMRIAIETATALAYLHASDIIHRDVKTNNILLDISFSVKVADFGLSRLLPNDVSHVSTAPQGTPGYLDPEYFQCYQLTDKSDVYSFGVVLIELISSMPAVDAGRERDEINLANLAIKKIQKGELGELVGPSLGFESDREVKRMLTSVAELAFQCVQGDKLLRPSMEQVLKTLVRIEGGNYEYEDLVQGNDDGDGTSHSEEVMFFTTRGTEVRVDLL* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2540 645 Pfam Protein kinase domain 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2540 645 SUPERFAMILY Protein kinase-like (PK-like) 309 601 IPR011009 -
Apr8g2540 645 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 9 609 - -
Apr8g2540 645 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
Apr8g2540 645 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2540 645 SMART serkin_6 329 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2540 645 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 609 IPR044652 -
Apr8g2540 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Apr8g2540 645 Gene3D Phosphorylase Kinase; domain 1 301 405 - -
Apr8g2540 645 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2540 Apr-Chr8 35330702 35334418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2540 30 605 Receptor kinase-like Gene Family AT1G25390 47.150 8.07e-153 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr8g2540 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2540 - - aprc:113871894 1325.84