Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2538 ATGGTTCCCCTTTCCATGTTCAAATCAGTTATTATCTTCGCCAGTATTCTGCTTCTCGCCTCAGCTGAGGATGGAAAGTGCCCCCCATCTTTCGACTGTGGTTTTCTTGGACTCATCAAATTCCCTTTCACAAGCACACTGCGACCACACTGCGGCGTATTGCCTATACGTGGCTGTGAAGATTATAATGCTTACGCTCCCAAAACCATCCAACTCATTAAAAGCTCAACATCAACATCCTACCCTGTTCTACAGGTTGAACCTCGTACCATAGTGATCAGAGATGATTATCAATATAAAAATATCCGAAACAGAAGTTGCAAAGCCTTCAGCAACAACATTACTCTTCCACACACCTCTCCTTTGGCTTCTTTCTACATCAAATATAATATCACTATCTTCAGATGCAATCACTCCCTCAATATCCCCGTTCCCAAAATTTTTAATAAATATTCGACCTGTTCTGAATACAATATCTACTATGGCCCTGCCAATACTGAAATGCCTCGGGGCTACCAGCGGCCCAGCTCTCTAGCACCATGTTCCACAATTCAGCATGCCGTAGTAGATAAGTGTAGTGACGACCCCTTTCAATGTCTGTCGGGTGATACAGCTATCGAAGTACAATTATCTGAAGATTGTGAAGAGTGTCTTGCTCACAGAAGAGGCCAATGTCAACTTGACAGTGAAGGAAAATTCTACTGCGCCAAAGAGGATAGAAATTTGGCGTGGAAATTAGGATTAGGTATTGGACTTCCTGGAATTATTATAATTGGACTACTGATTATATGTTACTACAAACTAAGATGTGCGTCTGATGTCTACTCAAATCCACACCTAGAGAGTGCCAGTATCTACTTCGGAGTTCCTGTATTCACCTATAAGGATCTTAAAATAGCAACAAAAAGTTTTGATCGTTCTCGAGAACTAGGAGAAGGAGGATTTGGGATTGTTTACTACGGAAAACTCCACGATGGACGTGAAGTTGCTGTGAAGCGCTTATATGAACACAACTATAGGCGAGTAGAACAATTCATGAATGAAATCAAGATCCTCACTCGCTTGCGCCACAAAAATCTAGTGTCTTTATATGGCTGCACATCACGTCACAGCCATGAACTATTGCTTGTCTATGAATACATTTCAAATGGGACTGTTGCTAGCCACCTCCGTCACGAATCAACAAATCCTGGGTTTTTGGGATGGCCCATCCGACTGAAAGTGGCCATAGAGACTGCCACTGCATTGGCTTATCTCCATGCCTCTGACATTATTCATCGTGATGTGAAAACAAACAACATTCTCCTTGACAACACTTTTTGTGTTAAAGTTGCTGATTTTGGATTGTCAAGATTGTTCCCTAATGATGTCACCCACGTTTCCACAGCTCCACAGGGAACTCCTGGTTATGTGGATCCTGAATATCACCGATGCTATCAGCTCACAAGCAAGAGTGATGTTTATAGCTTTGGGGTTGTCCTTATTGAGCTTATATCATCTATGCCTGCTGTTGATATGACTCGACATAAGGATGAGATTAACTTGGCAGATTTAGCTGTTAGGAAGATTCAAAAAAGTGCAATTCATGAGTTGGTGAATCCTTCCCTCGGTTTTGAGTCAAATAGTGATGTTAAAAGGAAAATAACTTCAGTAGCAGAATTGGCATTTCAGTGCTTGCAACGAGACAAAGAGTTGAGACCCTCTATGGATGAGGTTTTGGAGGTGCTAAAGAGAATTGAAAGTGAGAAGGATGAGTCTGGTCATCTAGAGAAAATAATAGTTCGTGGTGAAGGGATTTCACACAGTGATGTACTTCCATTACCACCACCTTCACCGGATCATGATGAGGTGAAACTCTTGAGGAATATGAAGTTGGCACCTTCGCCAAAGGCTGTGACAGAGAAATGGGACAGTCAATCCACTAGTCCTAATGTCAGCGCTGAATCGTCAAGCCAAATCTAA 1962 0.421 MVPLSMFKSVIIFASILLLASAEDGKCPPSFDCGFLGLIKFPFTSTLRPHCGVLPIRGCEDYNAYAPKTIQLIKSSTSTSYPVLQVEPRTIVIRDDYQYKNIRNRSCKAFSNNITLPHTSPLASFYIKYNITIFRCNHSLNIPVPKIFNKYSTCSEYNIYYGPANTEMPRGYQRPSSLAPCSTIQHAVVDKCSDDPFQCLSGDTAIEVQLSEDCEECLAHRRGQCQLDSEGKFYCAKEDRNLAWKLGLGIGLPGIIIIGLLIICYYKLRCASDVYSNPHLESASIYFGVPVFTYKDLKIATKSFDRSRELGEGGFGIVYYGKLHDGREVAVKRLYEHNYRRVEQFMNEIKILTRLRHKNLVSLYGCTSRHSHELLLVYEYISNGTVASHLRHESTNPGFLGWPIRLKVAIETATALAYLHASDIIHRDVKTNNILLDNTFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHRCYQLTSKSDVYSFGVVLIELISSMPAVDMTRHKDEINLADLAVRKIQKSAIHELVNPSLGFESNSDVKRKITSVAELAFQCLQRDKELRPSMDEVLEVLKRIESEKDESGHLEKIIVRGEGISHSDVLPLPPPSPDHDEVKLLRNMKLAPSPKAVTEKWDSQSTSPNVSAESSSQI* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2538 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Apr8g2538 653 SMART serkin_6 304 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2538 653 ProSiteProfiles Protein kinase domain profile. 304 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2538 653 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Apr8g2538 653 SUPERFAMILY Protein kinase-like (PK-like) 286 580 IPR011009 -
Apr8g2538 653 MobiDBLite consensus disorder prediction 633 653 - -
Apr8g2538 653 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Apr8g2538 653 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 653 IPR044652 -
Apr8g2538 653 Gene3D Phosphorylase Kinase; domain 1 278 380 - -
Apr8g2538 653 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Apr8g2538 653 MobiDBLite consensus disorder prediction 628 653 - -
Apr8g2538 653 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2538 Apr-Chr8 35319580 35322317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2538 31 647 Receptor kinase-like Gene Family AT1G25390 47.717 5.87e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr8g2538 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2538 - - aprc:113871893 924.465