Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2537 | ATGTCAGAACCATGTACTCCACTTTCAGATCCAAAATTCGATGCATGTCAACCCAAAATCTGTGGCAATAACCAAACTATAAGCTACCCGTTTTACATCGAAGGAGTACAGGAATCCTTCTGTGGGTACCCTGGTTTTGGCATCTCCTGTGATCCAAATGGCTTCCCAATTCTCAGTTTCTCTAATACCCAATACACCATCCACCAAATATTCTACGAAAATCAGTCACTGTTAGTGTCCAATCCCGTGTTTTCAACCTTAAGATCAAACATCAGTCAAGGTTGTCTTCAACGTACTCAGAACCTCACTCTTCCCAATAACACGTTCCATCTTGCTCCGCACCAAAAGGACGTGATATTGTTCTACGGGTGTGACTTACCGTCGCTGCCCAGAGAGCTGCAAGAGCACCGAATTGGGTGTTATGCAGAAAACAGGACGAGTTCGGTTCTGGCAATGTATAAGGAGGATAAAAATATAAGCTTGGTATCAAATAATTGCACGGGTGGGGTGGCGGATGTGACGGTGGAAGATGGAATAGGAGGGATTGAAGAGGCGCTGAGAAAAGGGTTCTTCTTACAATGGACGGCTGGTAATTGCAGCGTGTGCAGAAGTACTGGAGGGAGGTGCGGATTCGATGCTGATATGTACAGTTTCAGGTGCTTTTGTACTGATAGAGTTCATTCTGCCAAATGTGATGAAGCTAGGGAGTTGAGTTCGAAGCTCAAGTTGGCTATAGGTTTAGGAATTGGAATCCCAGGCATTTTGATAATTGTGTTACTGTTTCTCTTTCTACTCTACAAACGGAAACATGTTACCTCAGGTGGACACTTGGAATCAAGAGATGCTTATTCTGATTCCTCCTTAAATTCTCATCGAGAAAGTAGTAGTGTGTACTTTGGAGTCCCACTCTTCACGTATGGGGAACTTAAAGAAGCAACCCACAATTTTGACCATACTAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTATGGGAAACTCCCAGATGGACGTGAAGTTGCTATCAAGCGCTTATATGAGCACGACTACAGGCGAGTAGAACGGTTCATGAATGAAGTTGAGATCCTCACACGTTTGCGTCACAAAAATCTTGTGTCCCTCTATGGTTGCACTTCACGGCGCAGCCGTGAACTACTGCTTGTGTATGAATATGTTTCAAATGGCACCGTTGCTTGTCATCTCCATGGTGGATTATCAAAGCCTGGCTTACTACCGTGGTCTATACGAATCAAAATTGCCATTGAGACTGCTAGTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGTGACGTGAAAAGTAGCAACATTCTCGTTGACAACAATTTTGGTGTAAAAGTAGCAGATTTTGGGCTTTCAAGACTATTTCCCAATGATGCCACTCATGTCTCCACAGCTCCACAAGGGTCTCCAGGTTACCTTGACCCGGAATACTACCAATGCTACCAACTTACTAGTAAGAGTGATGTATATAGTTTTGGGGTTGTGCTGATTGAGTTGATAACATCCAAGCCTGCAGTTGATATGAACAGGAGTAAGGATGATATTAACTTGTCAAATCTAGCCATAAAGAAGATTCAAGAGAGTGCAATTGGTGAGCTGGTTGATCCAAGTCTTGGTTTTGATTCAGACAGCGAGGTTATGAGGATGATAGTTTCAGTGGCAGGATTGGCTTTTCAGTGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGGATGAAGTGTTGCTTGAACTGAGGAGAATTGAGGGTAGGAAAGATGAGGTAGAGTTCGTAGAGGAGGCAGATGTTGGTGGTGTTGGAGTTTCACACAGTAATGTGCATTCACCACCACCACCAACACCAACCTCACCCGAGTGGGATGAAGTTGGATTATTGAAGAATATGAGGCTTCCTACTTCCCCAAATACCGTCACAGATAATTGGGAAAGTAAATGTACTACGCCTAATGTCAGTGGTTAA | 1989 | 0.4384 | MSEPCTPLSDPKFDACQPKICGNNQTISYPFYIEGVQESFCGYPGFGISCDPNGFPILSFSNTQYTIHQIFYENQSLLVSNPVFSTLRSNISQGCLQRTQNLTLPNNTFHLAPHQKDVILFYGCDLPSLPRELQEHRIGCYAENRTSSVLAMYKEDKNISLVSNNCTGGVADVTVEDGIGGIEEALRKGFFLQWTAGNCSVCRSTGGRCGFDADMYSFRCFCTDRVHSAKCDEARELSSKLKLAIGLGIGIPGILIIVLLFLFLLYKRKHVTSGGHLESRDAYSDSSLNSHRESSSVYFGVPLFTYGELKEATHNFDHTKELGDGGFGTVYYGKLPDGREVAIKRLYEHDYRRVERFMNEVEILTRLRHKNLVSLYGCTSRRSRELLLVYEYVSNGTVACHLHGGLSKPGLLPWSIRIKIAIETASALAYLHASDIIHRDVKSSNILVDNNFGVKVADFGLSRLFPNDATHVSTAPQGSPGYLDPEYYQCYQLTSKSDVYSFGVVLIELITSKPAVDMNRSKDDINLSNLAIKKIQESAIGELVDPSLGFDSDSEVMRMIVSVAGLAFQCLQRDKELRPSMDEVLLELRRIEGRKDEVEFVEEADVGGVGVSHSNVHSPPPPTPTSPEWDEVGLLKNMRLPTSPNTVTDNWESKCTTPNVSG* | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2537 | 662 | MobiDBLite | consensus disorder prediction | 639 | 662 | - | - | |
Apr8g2537 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 290 | 588 | IPR011009 | - | |
Apr8g2537 | 662 | Pfam | Wall-associated receptor kinase C-terminal | 147 | 224 | IPR032872 | - | |
Apr8g2537 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 436 | 448 | IPR008271 | GO:0004672|GO:0006468 | |
Apr8g2537 | 662 | Pfam | Protein kinase domain | 318 | 585 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2537 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 322 | 344 | IPR017441 | GO:0005524 | |
Apr8g2537 | 662 | PANTHER | WALL-ASSOCIATED KINASE-LIKE PROTEIN | 16 | 661 | - | - | |
Apr8g2537 | 662 | MobiDBLite | consensus disorder prediction | 609 | 662 | - | - | |
Apr8g2537 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 287 | 392 | - | - | |
Apr8g2537 | 662 | ProSiteProfiles | Protein kinase domain profile. | 316 | 601 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2537 | 662 | SMART | serkin_6 | 316 | 591 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2537 | 662 | CDD | STKc_IRAK | 322 | 591 | - | - | |
Apr8g2537 | 662 | Pfam | Wall-associated receptor kinase galacturonan-binding | 16 | 80 | IPR025287 | GO:0030247 | |
Apr8g2537 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 393 | 604 | - | - | |
Apr8g2537 | 662 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 16 | 661 | IPR044652 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2537 | Apr-Chr8 | 35303511 | 35311086 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2537 | 197 | 662 | Receptor kinase-like Gene Family | AT1G25390 | 56.170 | 1.22e-173 | 507 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Apr8g2537 | Pkinase | 3.1e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2537 | - | - | aprc:113872417 | 1259.2 |