Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2537 ATGTCAGAACCATGTACTCCACTTTCAGATCCAAAATTCGATGCATGTCAACCCAAAATCTGTGGCAATAACCAAACTATAAGCTACCCGTTTTACATCGAAGGAGTACAGGAATCCTTCTGTGGGTACCCTGGTTTTGGCATCTCCTGTGATCCAAATGGCTTCCCAATTCTCAGTTTCTCTAATACCCAATACACCATCCACCAAATATTCTACGAAAATCAGTCACTGTTAGTGTCCAATCCCGTGTTTTCAACCTTAAGATCAAACATCAGTCAAGGTTGTCTTCAACGTACTCAGAACCTCACTCTTCCCAATAACACGTTCCATCTTGCTCCGCACCAAAAGGACGTGATATTGTTCTACGGGTGTGACTTACCGTCGCTGCCCAGAGAGCTGCAAGAGCACCGAATTGGGTGTTATGCAGAAAACAGGACGAGTTCGGTTCTGGCAATGTATAAGGAGGATAAAAATATAAGCTTGGTATCAAATAATTGCACGGGTGGGGTGGCGGATGTGACGGTGGAAGATGGAATAGGAGGGATTGAAGAGGCGCTGAGAAAAGGGTTCTTCTTACAATGGACGGCTGGTAATTGCAGCGTGTGCAGAAGTACTGGAGGGAGGTGCGGATTCGATGCTGATATGTACAGTTTCAGGTGCTTTTGTACTGATAGAGTTCATTCTGCCAAATGTGATGAAGCTAGGGAGTTGAGTTCGAAGCTCAAGTTGGCTATAGGTTTAGGAATTGGAATCCCAGGCATTTTGATAATTGTGTTACTGTTTCTCTTTCTACTCTACAAACGGAAACATGTTACCTCAGGTGGACACTTGGAATCAAGAGATGCTTATTCTGATTCCTCCTTAAATTCTCATCGAGAAAGTAGTAGTGTGTACTTTGGAGTCCCACTCTTCACGTATGGGGAACTTAAAGAAGCAACCCACAATTTTGACCATACTAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTATGGGAAACTCCCAGATGGACGTGAAGTTGCTATCAAGCGCTTATATGAGCACGACTACAGGCGAGTAGAACGGTTCATGAATGAAGTTGAGATCCTCACACGTTTGCGTCACAAAAATCTTGTGTCCCTCTATGGTTGCACTTCACGGCGCAGCCGTGAACTACTGCTTGTGTATGAATATGTTTCAAATGGCACCGTTGCTTGTCATCTCCATGGTGGATTATCAAAGCCTGGCTTACTACCGTGGTCTATACGAATCAAAATTGCCATTGAGACTGCTAGTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGTGACGTGAAAAGTAGCAACATTCTCGTTGACAACAATTTTGGTGTAAAAGTAGCAGATTTTGGGCTTTCAAGACTATTTCCCAATGATGCCACTCATGTCTCCACAGCTCCACAAGGGTCTCCAGGTTACCTTGACCCGGAATACTACCAATGCTACCAACTTACTAGTAAGAGTGATGTATATAGTTTTGGGGTTGTGCTGATTGAGTTGATAACATCCAAGCCTGCAGTTGATATGAACAGGAGTAAGGATGATATTAACTTGTCAAATCTAGCCATAAAGAAGATTCAAGAGAGTGCAATTGGTGAGCTGGTTGATCCAAGTCTTGGTTTTGATTCAGACAGCGAGGTTATGAGGATGATAGTTTCAGTGGCAGGATTGGCTTTTCAGTGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGGATGAAGTGTTGCTTGAACTGAGGAGAATTGAGGGTAGGAAAGATGAGGTAGAGTTCGTAGAGGAGGCAGATGTTGGTGGTGTTGGAGTTTCACACAGTAATGTGCATTCACCACCACCACCAACACCAACCTCACCCGAGTGGGATGAAGTTGGATTATTGAAGAATATGAGGCTTCCTACTTCCCCAAATACCGTCACAGATAATTGGGAAAGTAAATGTACTACGCCTAATGTCAGTGGTTAA 1989 0.4384 MSEPCTPLSDPKFDACQPKICGNNQTISYPFYIEGVQESFCGYPGFGISCDPNGFPILSFSNTQYTIHQIFYENQSLLVSNPVFSTLRSNISQGCLQRTQNLTLPNNTFHLAPHQKDVILFYGCDLPSLPRELQEHRIGCYAENRTSSVLAMYKEDKNISLVSNNCTGGVADVTVEDGIGGIEEALRKGFFLQWTAGNCSVCRSTGGRCGFDADMYSFRCFCTDRVHSAKCDEARELSSKLKLAIGLGIGIPGILIIVLLFLFLLYKRKHVTSGGHLESRDAYSDSSLNSHRESSSVYFGVPLFTYGELKEATHNFDHTKELGDGGFGTVYYGKLPDGREVAIKRLYEHDYRRVERFMNEVEILTRLRHKNLVSLYGCTSRRSRELLLVYEYVSNGTVACHLHGGLSKPGLLPWSIRIKIAIETASALAYLHASDIIHRDVKSSNILVDNNFGVKVADFGLSRLFPNDATHVSTAPQGSPGYLDPEYYQCYQLTSKSDVYSFGVVLIELITSKPAVDMNRSKDDINLSNLAIKKIQESAIGELVDPSLGFDSDSEVMRMIVSVAGLAFQCLQRDKELRPSMDEVLLELRRIEGRKDEVEFVEEADVGGVGVSHSNVHSPPPPTPTSPEWDEVGLLKNMRLPTSPNTVTDNWESKCTTPNVSG* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2537 662 MobiDBLite consensus disorder prediction 639 662 - -
Apr8g2537 662 SUPERFAMILY Protein kinase-like (PK-like) 290 588 IPR011009 -
Apr8g2537 662 Pfam Wall-associated receptor kinase C-terminal 147 224 IPR032872 -
Apr8g2537 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Apr8g2537 662 Pfam Protein kinase domain 318 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2537 662 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Apr8g2537 662 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 16 661 - -
Apr8g2537 662 MobiDBLite consensus disorder prediction 609 662 - -
Apr8g2537 662 Gene3D Phosphorylase Kinase; domain 1 287 392 - -
Apr8g2537 662 ProSiteProfiles Protein kinase domain profile. 316 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2537 662 SMART serkin_6 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2537 662 CDD STKc_IRAK 322 591 - -
Apr8g2537 662 Pfam Wall-associated receptor kinase galacturonan-binding 16 80 IPR025287 GO:0030247
Apr8g2537 662 Gene3D Transferase(Phosphotransferase) domain 1 393 604 - -
Apr8g2537 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 661 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2537 Apr-Chr8 35303511 35311086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2537 197 662 Receptor kinase-like Gene Family AT1G25390 56.170 1.22e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr8g2537 Pkinase 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2537 - - aprc:113872417 1259.2