Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2530 ATGTTCCCTTTTGTTTTGCTGTTCTTTCTTCTTTGCTGCAATTTTCCTGCACCTGGGGTTTCTCTGAATGCTGAAGGCTATGTGCTTTTGACACTGAAACAGTCCATCACAGACCCACAAGGGTGTATGAGTAACTGGAATTCTTCCGATGAAAACCCTTGTTCATGGAATGGGATCAGTTGCAAGGACCAAGCTGTTGTGTCAATTAGTATCCCAAAAGGGAAACTTTATGGCTCTCTTCCTTCAACTCTAGGATCCCTTTCCCAGCTTCGCCATGTGAACTTTAGGAACAACAAGCTCTTTGGAAACTTGCCTGCACAGCTCTTCCAAGCTCTGGGACTGCAAAGTTTGGTGCTTTATGGCAATTCATTTTCTGGGTCTGTTCCAAGTGAGATTCAGAAGCTCAGGTACCTTCAATTTCTTGATTTATCACAAAATTTCTTCAATGGGACATTCCCTGCTTCAATTGTCCAATGCAAGAGGCTCAAAACCCTTATTCTCAGTCGGAACAATTTCACTGGCCCTATGCCGGATGGCTTTGGTACTGGTTTGTTTTCTCTGGAAAAACTAGACCTTTCTTTCAATCAGTTCAATGGTTCAATTCCCAGTGACATGGGAAATCTATCAAGCCTGCAAGGAACTGCTGATTTGTCTCATAATCATTTTAGTGGTTCAATCCCAGCCAGCCTTGGTAAACTGCCTGAGAAGGTTTACATTGATCTCACTTACAACAATTTAAGTGGCCCAATACCGCAAAATGGTGCCTTAATGAATAGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGGTTCTGATACTCCAGCTGCGAGTTCACCTTCCTCATTTCCATTTATGCCTAACAACTATCCACCTCAGGATACTGGTAATGGTTCCAGGGAAAGTGAGAAAAACAAAGGGCTTAGTAAGGGAGCTGTGATTGGCATTGTTGTGGGTGATTTAATTGGAATTTGCCTCTTGGGTTTGCTGTTCTCTTACTGCTACTCAAGGGTTTGTGGCTTTAACCAGGATCTGGATGAAAATGGAGTTAGTAAGGGAAGGAACGGCAGGAAAGAGTGCTTCTGCTTCAGAAAGGATGAATCTGAGGCCCTATCTGACAATGTTGAGCAATATGATCTTGTTCCACTAGATTCCCAGGTAACCTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTTCTTGAAGATGGACTTGCTTTGGCTGTGAGAAGACTGGGCGAGGGAGGTTCTCAAAGGTTTAAAGAGTTTCAAACAGAGGTTGAAGCAATAGGAAAGTTAAGACATCCTAATATTGTGACCCTCAAAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCCAATGGAAGCCTTGCTACTGCAATTCATGGGAAGGCTGGACTCGTGTCATTTACACCCCTATCTTGGTCCTACCGATTGAAAATCATGAAAGGAACTGCAAAAGGATTGGTGTATCTGCATGAATTTAGCCCCAAAAAATATGTCCATGGAGACCTCAAACCAAGTAACATACTTCTAGGACATAATATGGATCCCCACATTTCTGATTTTGGACTTGGGCGCCTCGCAAATATTGCTGGAGGGTCTCCAACCTTGGAATCCAACCGAGTGGCTTCAGAAAAACTACATGAAAGACAAAAGAGCTTGTCCACTGAAGTCACGACTAACGTTTTTGGAAACGGTTATCAGGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTATTCATATGGTGTGATATTGTTAGAAATGATCACAGGAAGATTACCCATTGTCCAAGTGGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAGGAAAAGAAGCCACTCTCGGACGTGTTGGACCCATACTTGGGTGAAGATGCAGATAAAGAGGAGGAGATGATTGCAGTTCTGAAGATTGCAATGGCTTGTGTTCATAGCAGCCCTGAAAAGAGACCTACAATGAGGCACGTGCTTGATGCTTTGGATAGACTGTCCATTTCATCTGATTGA 2130 0.43 MFPFVLLFFLLCCNFPAPGVSLNAEGYVLLTLKQSITDPQGCMSNWNSSDENPCSWNGISCKDQAVVSISIPKGKLYGSLPSTLGSLSQLRHVNFRNNKLFGNLPAQLFQALGLQSLVLYGNSFSGSVPSEIQKLRYLQFLDLSQNFFNGTFPASIVQCKRLKTLILSRNNFTGPMPDGFGTGLFSLEKLDLSFNQFNGSIPSDMGNLSSLQGTADLSHNHFSGSIPASLGKLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCGSDTPAASSPSSFPFMPNNYPPQDTGNGSRESEKNKGLSKGAVIGIVVGDLIGICLLGLLFSYCYSRVCGFNQDLDENGVSKGRNGRKECFCFRKDESEALSDNVEQYDLVPLDSQVTFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLKAYYWSVDEKLLIYDYIPNGSLATAIHGKAGLVSFTPLSWSYRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMDPHISDFGLGRLANIAGGSPTLESNRVASEKLHERQKSLSTEVTTNVFGNGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLGEDADKEEEMIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSISSD* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2530 709 Gene3D Transferase(Phosphotransferase) domain 1 481 708 - -
Apr8g2530 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Apr8g2530 709 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 708 - -
Apr8g2530 709 SUPERFAMILY L domain-like 23 276 - -
Apr8g2530 709 MobiDBLite consensus disorder prediction 276 313 - -
Apr8g2530 709 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 708 - -
Apr8g2530 709 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Apr8g2530 709 CDD STKc_IRAK 411 704 - -
Apr8g2530 709 Pfam Protein kinase domain 411 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2530 709 MobiDBLite consensus disorder prediction 281 307 - -
Apr8g2530 709 Gene3D Ribonuclease Inhibitor 16 71 IPR032675 -
Apr8g2530 709 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Apr8g2530 709 Gene3D Phosphorylase Kinase; domain 1 374 480 - -
Apr8g2530 709 ProSiteProfiles Protein kinase domain profile. 405 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2530 709 SMART serkin_6 410 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2530 709 Gene3D Ribonuclease Inhibitor 72 287 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2530 Apr-Chr8 35246185 35249252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2530 1 709 Receptor kinase-like Gene Family AT2G01210 67.361 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr8g2530 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2530 - - gmx:100792873 1234.94