Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2526 ATGGAGGCCCAACCTCCAACGCCCTCCACCGCTCCGCCGCTGTCCTCGGTGGCTCCGCCGCCACCTCACCTCAACTACCCCGATTCCGTCGAGTCCTCCCCACGCTCCAGGAACACCGACTCCTGGGACGAACCCTTCCCGCCGGCCTCCACCAAGCTCCGCCTCATGTGCAGCTACGGTGGACACATCGTCCCTCGCCCTCACGATAAGTCCCTCTGCTACGTCGGCGGCGACACCCGCATCATCGTGGTGGAACGCAACACCTCACTCGCGGACCTTTCCACGCGCCTCTCGAAAACCTTCCTGAACGGAAGAACCTTCACCCTCAAGTACCAGCTCCCCAACGAAGACCTCGATTCCCTCATTTCCGTTACAACCGATGAAGACTTGGAGAACATGATCGACGAGTACGATCGAACTACTGCCGCTAATTCCTCCGTCAAACCCTCGCGAATTCGTCTCTTTCTCTTCCCTACTAAACCCGATTCCACTCACTCTATTCCCCCTCAGATTCTCGATACCTCCGCCAAATCCGATGATTGGTTCCTCAACGCCCTAAACGGCGCCGGATTGCTCAATCGAGGGTTTTCCGATTCTGCTTCTGTTAATTGCCTTTTGGGTCTTGATGACGAGGTCGCCGGGAACAACCTTGAACCCGGTTCGAGGGATGTTGCTGAAGGTGGTGGTTCTTCGCAGCCTGGATCTTTTGGGAATGGGAAGAATTTGAAGCAGGATGTTCACTCCGTTCCCGATTCGCCTATGTTGGAGACTACGTCGTCGTTTGGGTCTACTTCTTCGTCGCCGTCGCTGGCCAATTTGCCTCCGATTAGGGTCCACGTGGAGGATGGGGGTGGGGTTAGGGTGCAGGATCAGAAGGTGTTGGGGATTGAGGAACAGTTTGCTCAGATGGGTGTGGGTGTGGGTGTTGGTGTTGGGCAGAAGCAGGATGAGGGCTTCGTGGTGCTGTCTTCGCCGCCTCCGCCGCCAGTGCCTGCTACCCTCTCCGCCGCAGCAGTGGGTGTGCCGATTGGCCCTACGGCGGTGGCTGGTGAGTACCAAAACCGGGTTGTTTCTGATGATGAGAGATCCGATCATGGGGTTCCCGTGGGGTATAGAAAACCACCAACTCCTCAGCCACAGGCACAGTTGCAGACACAGACTCAGACCCAAACGCACGCTCCTCAATTTCAACAAAAGTCAACCGGTGGCGGCGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTCAATGCAATTTCGCGTCCAAAACCAGTCTATCAAGACCAAGTTCAGATTCAATCTGGGACTACAAGGGTTCCTAGTAACCCTGTGGATCCGAAGCTTAATGTGTCTGATCCGCATGGTCGGATCCAGATGCAGCAACATGTACAGGACCCTGGATATTTATTGCAACAGCAATTTGATCAGCAACAGCAGCAGCTGCCGCCTCAGCAGCAGCAGCAGCAGTTTATACACGGCACACATTTCATTCACCATAACCCTGCAATTCCTACATACTATCCTGTATATCCTTCCCAGCAGCAGCCCCATCACCAACATCCCCAGGTTTACTATGTGCCTGCAAGACAGGCCCAAGCTTATAATTTGCCCGTGCCACAGGCTAATATGGGCGAATCTAATGCTGCCATCCCTTCTAGCCGGCCCCAGACTCCACCGAATCCTGCTACATTGGTTCCACAGTCTGCTGCTTACAATGCCATTAGAAACGCTCCCCTACCTAAAACTGAAATGCCAGCAGCTGGTTACAGAGGTGCCACTGCAGGCACCCCTCAATTAGTTCAAGTTCCTACAAGTCAGCATCAGCAACAATATGTCACTTACTCCCAGATCCACCATCCATCTCAGTCCATAGCCCCCAATTCTGCTGCCCCTCCCAACTATGCTTTTGATTATGCAGACCCTGCTCATGCTCAAATATACTACTCTCAACCTCTGGCACCCACAATGCCTTCACAGTACCAGACCATGACAGCTGCTGCTGTGGTGATGCCGGAAGTTTCTGCTCAGCATCCCTCAGAGGGTGTGAAGCAGCAGATGAGAACCTCACAGCCATTATAA 2091 0.5375 MEAQPPTPSTAPPLSSVAPPPPHLNYPDSVESSPRSRNTDSWDEPFPPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVVERNTSLADLSTRLSKTFLNGRTFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTTAANSSVKPSRIRLFLFPTKPDSTHSIPPQILDTSAKSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDEVAGNNLEPGSRDVAEGGGSSQPGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGGGVRVQDQKVLGIEEQFAQMGVGVGVGVGQKQDEGFVVLSSPPPPPVPATLSAAAVGVPIGPTAVAGEYQNRVVSDDERSDHGVPVGYRKPPTPQPQAQLQTQTQTQTHAPQFQQKSTGGGVVDLPSPDSVSSDSSLNAISRPKPVYQDQVQIQSGTTRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGYLLQQQFDQQQQQLPPQQQQQQFIHGTHFIHHNPAIPTYYPVYPSQQQPHHQHPQVYYVPARQAQAYNLPVPQANMGESNAAIPSSRPQTPPNPATLVPQSAAYNAIRNAPLPKTEMPAAGYRGATAGTPQLVQVPTSQHQQQYVTYSQIHHPSQSIAPNSAAPPNYAFDYADPAHAQIYYSQPLAPTMPSQYQTMTAAAVVMPEVSAQHPSEGVKQQMRTSQPL* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2526 696 ProSiteProfiles PB1 domain profile. 52 159 IPR000270 GO:0005515
Apr8g2526 696 PANTHER OS05G0427100 PROTEIN-RELATED 13 687 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 1 47 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 411 448 - -
Apr8g2526 696 PANTHER EXPRESSED PROTEIN 13 687 - -
Apr8g2526 696 Gene3D - 72 158 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 352 457 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 251 272 - -
Apr8g2526 696 SUPERFAMILY CAD & PB1 domains 68 167 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 217 276 - -
Apr8g2526 696 Pfam PB1 domain 68 158 IPR000270 GO:0005515
Apr8g2526 696 MobiDBLite consensus disorder prediction 1 27 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 29 45 - -
Apr8g2526 696 CDD PB1_UP2 56 157 - -
Apr8g2526 696 MobiDBLite consensus disorder prediction 377 404 - -
Apr8g2526 696 SMART PB1_new 67 159 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2526 Apr-Chr8 35224055 35227552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2526 49 223 MAP Kinase Kinase Kinase AT1G79570 34.831 1.04e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2526 - - gmx:100775954 978.393