Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2521 ATGGGAGATGAGACAAGGTCATTGATCAATTATGTTCCTAGTTTTGCACGAGGCTTTAATCTTCTGCTACTGCACGATGACAAATCGTCTCTCGTGTATCTCTCATCACTGCTTGAGCTTTACTCATTCAAAGTAACTGCTACAGATGACTCATCAGCAGCAGCATCCATGATTTGTGATCATAAAGGCGGGTTCAAACTCGTCATGGCCAAAGCCAATATGCCTGGCATGGATCCCCTTTCATTTCTGGATGTAGTGCTTGGAAAGGACATTCCTGTCATCTTCATCCACTCTGGACGATTTGATGATGTAACTCGTAAGGCTTTGGCTACTGGATTATGTTACTTCCTCGAGGAACCAATCCGTTCAAGTGATCTCAAATATGTATGGCAACATGCATATCGCTCAAAAGCCCATTCAACCAAAGAAACTCAAAATGCTGAGGAGTCTCAGGACAAGGTGGGCCGTGCAAAGGTTCTTAGAGCAAAGGGAGAAAGAAACAAGGGTGCTAAAGGGGGCAAACTAAAAGAGAAGAGAAGAGTTGATGACTGCACAATGCAAGATGCTCGTCCAAAGAAGATATTAAGTTGGATGAATGAGCCTTTCCTCACAGTTCGCCAGGTTGCAAGTCATCTCCAGAAACACAAATTGCGGTTGAAGCGCATAGAGAATGCTCGCTTTTCTGAGTTGCACCCAGTAAGCACGTCAATATCATCAAACTCAAGCCACAAAGCACCGTTGCCTTCACCATCTGAAGTGTCCAGCTTAGGAACAAAAGGTCTCCGAACACCAACTGCTTCCTCGAATGAGAGCCATGAGCAAAACCTGTCTCTCAAAGAGCTTGAAACTCCAGAGAATTCAACATTTCCAACTGAAAACCGAACTTTAGATTCTTCAATGGATCAAAACCAACCTGCTACTGAATACAATGATATCATAAAAATGCTCGTGGAGGACTCTGAAAGTTTTGATTTGATTGAAAATGGAACTGATCCTGGTGATGTTGACCAATACTGTGAGATGCTAAAGACAGTTTTAGATGGGAACAGTTCCACTCCGAAGATCCCATGA 1071 0.4332 MGDETRSLINYVPSFARGFNLLLLHDDKSSLVYLSSLLELYSFKVTATDDSSAAASMICDHKGGFKLVMAKANMPGMDPLSFLDVVLGKDIPVIFIHSGRFDDVTRKALATGLCYFLEEPIRSSDLKYVWQHAYRSKAHSTKETQNAEESQDKVGRAKVLRAKGERNKGAKGGKLKEKRRVDDCTMQDARPKKILSWMNEPFLTVRQVASHLQKHKLRLKRIENARFSELHPVSTSISSNSSHKAPLPSPSEVSSLGTKGLRTPTASSNESHEQNLSLKELETPENSTFPTENRTLDSSMDQNQPATEYNDIIKMLVEDSESFDLIENGTDPGDVDQYCEMLKTVLDGNSSTPKIP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2521 356 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 188 218 IPR006447 GO:0003677
Apr8g2521 356 MobiDBLite consensus disorder prediction 139 184 - -
Apr8g2521 356 MobiDBLite consensus disorder prediction 232 305 - -
Apr8g2521 356 Gene3D - 19 155 - -
Apr8g2521 356 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 299 IPR045279 GO:0009736
Apr8g2521 356 Gene3D - 174 223 - -
Apr8g2521 356 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR11-LIKE 13 299 - -
Apr8g2521 356 SUPERFAMILY Homeodomain-like 186 221 IPR009057 -
Apr8g2521 356 ProSiteProfiles Response regulatory domain profile. 20 134 IPR001789 GO:0000160
Apr8g2521 356 SUPERFAMILY CheY-like 18 144 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2521 Apr-Chr8 35176758 35180817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2521 15 263 Response Regulator Gene Family AT2G25180 29.066 1.13e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr8g2521 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2521 - - aprc:113871889 684.1