Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2519 ATGGAGAAAGTTTGTGAATTCTGCACAGCTTTTAGGCCACTTGTTTACTGCAAGGCTGATGCCGCATATCTTTGTCTATCCTGTGATGCAAAGGTGCATTTGGCAAATGCATTGTCTGGCCGACACCTCCGTACCCTTGTGTGTAACTCATGCGGATACCATCTTGCTTATGTTCTGTGTTTGGACCACAAAATGTTAATCTGTCGAGATTGTGATCAAAAGTTGCACAATGTTTCTTTACCACATCACAAAAGAGCTATCAGAAGCTTCATGGGTTGCCCTTCTGCCAAAAACTTTGCAGCACTCTGGGGTTTTGAATTGAATAAGATTGAAAACAGTGATAGTCAGGATCAGTTTGCTTCCGTTTCTTGTGTTTCTGCAGATTTGAATGGGGTACAAGTCTCAGGAAAGCTTAGCACTGGCAGTCAAACTGGGGTCTCGTCAACGCTATCTGGGGCCAAACTTGATGGGGGTTCGAGCAGTCAACAAGGTCAGATATTGTACAGTGATCAAGAGCGACAAACTATTCTGCAGCAGATTATTGATTTGAAACGGCTTCAGCTAAATGAGGAGATTGGCCATTCTGCAAAGATAAATAGGTTACAAGAAAAAGATTTATCTCCTTCAAAATATCATACTCTTAAGAAATTGAACAAAAAATTCAATCAGCAAGCACCAAATTCCCAGGATCTTGCTACTGATCTTTTGGAGAAAGACTGTCCCATTATGGAGTTGAATCCTGAAACTTTGCCTTCTACGTTTTCTCAAATTGATAATTTATCTTCATCTTCAATTATAGACCTTCCCTTGCATGGAGAGTTGTTCTGGACATGCAGAAGTCCACTTCGGAGTAATCAGTTGTGGTCCCAAAACATTCAAGACCTTGGGATATGTGAAGATTTTGTTTGTCAAGATGATTTTAACATACCTGATGTTGACTTAACTTTCCAAAACTTTGAGGAATTATTTGGAGGAGATCAAGATCCAGTCAGATTATTGCTTGATGATAAAGATGTCTCCTACTCTTTTTTGGAGAAAGATATGTCAGTTGACAAGTCAGATATTGACAACCCAAATGCAATGGAGGTCTGA 1092 0.3993 MEKVCEFCTAFRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRTLVCNSCGYHLAYVLCLDHKMLICRDCDQKLHNVSLPHHKRAIRSFMGCPSAKNFAALWGFELNKIENSDSQDQFASVSCVSADLNGVQVSGKLSTGSQTGVSSTLSGAKLDGGSSSQQGQILYSDQERQTILQQIIDLKRLQLNEEIGHSAKINRLQEKDLSPSKYHTLKKLNKKFNQQAPNSQDLATDLLEKDCPIMELNPETLPSTFSQIDNLSSSSIIDLPLHGELFWTCRSPLRSNQLWSQNIQDLGICEDFVCQDDFNIPDVDLTFQNFEELFGGDQDPVRLLLDDKDVSYSFLEKDMSVDKSDIDNPNAMEV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2519 363 CDD Bbox1_BBX-like 4 47 - -
Apr8g2519 363 SMART bboxneu5 48 87 IPR000315 GO:0008270
Apr8g2519 363 SMART bboxneu5 1 47 IPR000315 GO:0008270
Apr8g2519 363 MobiDBLite consensus disorder prediction 136 164 - -
Apr8g2519 363 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 362 - -
Apr8g2519 363 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Apr8g2519 363 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2519 Apr-Chr8 35165449 35169642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2519 1 358 C2C2-CO-like Transcription Factor Family AT1G68190 39.011 3.89e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2519 - - gmx:100819787 607.831