Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2517 | ATGGGTTTGCAAAACCAATTAAACGACGTGTCGTCGGGTTCGATTCCGCTGCTGGTGTTGGCGCACATAGCCACCTGCGTCAACTACCTCCGCTCCATGCTCCTCGCTCTCCTCCAATCACTCGGTCTCTCCAGATTCCACACCGACCAGATCGTCGACGACAGCTTCTTCGCCGCCGTCGGATCCGGCCTTGCCGGACTCATCATGCTCTCCGATCAGCTAACCCTCAACAACCAATTCTTCTACAACGGCACCGCCGACCACGACTGCGTGGTGTGCCAGACCACTTTCAACGACGGCGACCACGTTCGCATGCTTCCCTGTCGCCACGTCTTCCACCGCCGATGCTTCGATGGCTGGCTCCACTACAACTTCAACTGCCCCCTTTGCCGGTCACCACTTTTCTCCGATGAGCGCGTGGCTCTCACGGAGCGTCGCCTCGGTCGCCAACTCGTCTCCTGGTTCTCCCTCAGCTGA | 477 | 0.5912 | MGLQNQLNDVSSGSIPLLVLAHIATCVNYLRSMLLALLQSLGLSRFHTDQIVDDSFFAAVGSGLAGLIMLSDQLTLNNQFFYNGTADHDCVVCQTTFNDGDHVRMLPCRHVFHRRCFDGWLHYNFNCPLCRSPLFSDERVALTERRLGRQLVSWFSLS* | 159 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2517 | 158 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 73 | 140 | IPR013083 | - | |
Apr8g2517 | 158 | SUPERFAMILY | RING/U-box | 89 | 137 | - | - | |
Apr8g2517 | 158 | SMART | ring_2 | 90 | 130 | IPR001841 | - | |
Apr8g2517 | 158 | Pfam | Ring finger domain | 89 | 131 | IPR001841 | - | |
Apr8g2517 | 158 | ProSiteProfiles | Zinc finger RING-type profile. | 90 | 131 | IPR001841 | - | |
Apr8g2517 | 158 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 156 | - | - | |
Apr8g2517 | 158 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA2A | 1 | 156 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2517 | 1 | 157 | C3H Transcription Factor Family | AT1G15100 | 50.617 | 2.41e-47 | 149 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2517 | K16282 | - | gmx:100803789 | 264.233 |