Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2506 ATGGCGCGAGAGAATCACAAAACGAAGGCAGTGAATATGCTCCGAAGCAGAATCTGCGATGCCAAATTCATCTACAACGATTCTCCAGACAGCAACTACAGCAAGTTGAAATTCATGATATCAAGTTCAGTGACGGAGGCATGCAACAACTCTATTCTTCTTCTCGGTCCTCGTGGCTCCGGCAAGAGTGCGGTTTTGGAGCTTGTTATTCAAGATTTGATGCAACAATATCCCGATTCAATTTCAGCGATCAGGTTGAATGGGCTTTTGCATAGTGATGATATATCTGCATTCAAGGAAATAGCTAGGCAGTTGTGCATGGAGCATCAATTGCTATTCTCGAAAGCGGCTTCGTTTGATGACAACTCCCAATTTATGGTAGCCATGCTAAAGGAATGCGGATTAGCACATAAAACAGTAATTTTTGTTCTGGATGAGTTTGACCTCTTTGCCCAGGGTAAACAGCGGTTACTTTATAGTTTGCTGGATGCAATGCAATCAATAACATCGCAGGCTGTTGTACTTGGTATTAGTTGCCGTCTGGATGCAGATCAGTTGTTGGAGAAAAGGGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTTTTACCACCTTCAACGGAAGACTCACAGAGGTTACTGGTGCGCATACTGACATTACCAATTGATTCAAGCTTTCCACATGATTATGCTGTTGAATTTAATAAAAAGGTCCAAAATATTATAGCAGATAGAAGATTCAAAGAAACTTTCAATAAATATTTAAATTTTGACTCCTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCAGATTGATTTGCAGACTGGGTTCCTGACCCAGGAGAACATTGAAACTGCATTTTCAAGTATCCAGAGGCAGCCTAAACTGGAATGTTTAAGAAATTGCTCCATTTTAGAACTTTATATTTTGGTTTGCATGAAGAGATTGGAAGTTAAGGAGCAAAGTTTATGCAACTTCAATTCTGTAATGAAAGAGTATAAAAGTATACATGATTCCTTCCAGACTTCTGATTATTATGCACGAAATGTCTGCTTAAGGGCATTTGAACATCTCATTCATCGTGAATTATTATGTTTCACAGACAATAGAGGACATAGTTTGTCTATTGAGTTTCGTCCTGTAAAGCTTTTAATTTCATCTGTTGAACTGCATCAGGGACTAAAAGCATATCATTCGTGCCCTGCTATCCTTCAGAAATTAATCGATCGTGAAGGCTAA 1251 0.3917 MARENHKTKAVNMLRSRICDAKFIYNDSPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKSAVLELVIQDLMQQYPDSISAIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSTEDSQRLLVRILTLPIDSSFPHDYAVEFNKKVQNIIADRRFKETFNKYLNFDSSVKHLLRFLFCAVSQIDLQTGFLTQENIETAFSSIQRQPKLECLRNCSILELYILVCMKRLEVKEQSLCNFNSVMKEYKSIHDSFQTSDYYARNVCLRAFEHLIHRELLCFTDNRGHSLSIEFRPVKLLISSVELHQGLKAYHSCPAILQKLIDREG* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2506 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 251 IPR027417 -
Apr8g2506 416 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 216 396 IPR032705 -
Apr8g2506 416 CDD AAA 50 198 - -
Apr8g2506 416 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 8 415 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Apr8g2506 416 Gene3D - 30 204 IPR027417 -
Apr8g2506 416 Pfam AAA ATPase domain 34 167 IPR041664 -
Apr8g2506 416 PIRSF ORC4 2 416 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2506 1 413 Core DNA Replication Machinery Family AT2G01120 64.303 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2506 K02606 - gmx:100800582 704.901