Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2498 ATGGCTTCACGCAGACTCTTATCGACTCTGCTTCGATCTTCCCTCCGTCGATCTCCATCAAAACCCTCAATTTCCTCTTCAACATCGAGGCTCTCTTCTTCTGGCCGTGCCTCTCCCTATGGTTACCTCCTCAACCGCGTCAACGAGTATGCCACTTCCGCTGCTGCCGCTGCTGCTCCTCCGCCTCCGGCCAAGAAGGATGTCGGTGGCGGTGGCAAGATCGTCGATGAGCACACCGGTAAGGGTGCGATCGGCCAGGTTTGCCAGATCATTGGTGCCGTCGTCGATGTCAGATTCGAGGATGGTTTGCCTCCGATCATGACCGCCCTTGAGGTTCTGGATCATCCGTCACGGCTGGTGTTGGAGGTGGCTCAGCATTTGGGTGAGGGCGTTGTTCGAACCATTGCTATGGATGCCACTGAAGGAGTTGTTAGAGGGTGGCGCGTACTCAACACTGGCTCCCCTATTACCATTCCTGTTGGTAGGGCTACCCTTGGTCGTATCATAAATGTCATTGGAGAGCCAATTGATGAAAAGGGCGAAATCAAAACCGAGCATTATTTGCCCATTCATAGAGAAGCTCCTTCTTTTGTTGAGCAAGCAACTGAGCAGCAGATTCTTGTTACTGGGATCAAGGTTGTTGACATGCTTGCTCCATATCAAAGAGGTGGAAAGATTGGGCTGTTTGGGGGTGCCGGTGTAGGAAAAACTGTGCTTATTATGGAACTTATTAACAATGTTGCAAAAGCTCACGGTGGTTTCTCTGTCTTTGCTGGTGTTGGAGAACGAACCAGAGAGGGTAATGACTTGTACAGAGAAATGATTGAGAGTGGTGTCATTAAGCTTGGTGACAAACAGAGTGAAAGCAAATGTGCTCTTGTGTATGGTCAAATGAACGAGCCCCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGACTTACTGTGGCTGAACACTTCCGTGACGCTGAAGGGCAAGATGTGCTTCTTTTTGTAGACAACATTTTCCGCTTTACCCAAGCTAACTCAGAGGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCTGTTGGATACCAACCAACCTTGTCTACTGATCTTGGAAGTCTTCAAGAGCGTATTACAACAACCAAGAAGGGTTCAATTACCTCTGTTCAAGCCATCTATGTGCCTGCTGATGACTTGACAGATCCTGCTCCTGCTACCACATTTGCTCATCTGGATGCCACAACAGTGTTGTCACGTCAGATCTCCGAGCTTGGTATCTATCCTGCTGTTGACCCCTTGGATTCTACATCTCGTATGCTTTCCCCACTTATTTTGGGTGAGGAACACTATCAAACTGCTCGTGGTGTACAGAGAGTTCTTCAAAACTACAAGAATCTTCAAGATATCATTGCTATTTTGGGAATGGATGAGCTCAGTGAAGATGATAAATTGACTGTTGCTCGTGCCCGTAAAATTCAGAGATTCTTGAGCCAGCCTTTCCATGTGGCAGAAGTCTTCACTGGTGCCCCAGGAAAATATGTTGAGTTGAAGGAGAGCATTAACAGCTTCCAGGGTGTGTTGGATGGCAAATACGATGACCTCCCAGAGCAGTCGTTTTACATGGTTGGAGGTATTGAAGAGGTCATTGCTAAGGCAGAGAAGATTGCTAAGGAATCAGCCGCGTCGTAA 1671 0.4841 MASRRLLSTLLRSSLRRSPSKPSISSSTSRLSSSGRASPYGYLLNRVNEYATSAAAAAAPPPPAKKDVGGGGKIVDEHTGKGAIGQVCQIIGAVVDVRFEDGLPPIMTALEVLDHPSRLVLEVAQHLGEGVVRTIAMDATEGVVRGWRVLNTGSPITIPVGRATLGRIINVIGEPIDEKGEIKTEHYLPIHREAPSFVEQATEQQILVTGIKVVDMLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGSLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGEEHYQTARGVQRVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESINSFQGVLDGKYDDLPEQSFYMVGGIEEVIAKAEKIAKESAAS* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2498 556 SMART AAA_5 222 494 IPR003593 -
Apr8g2498 556 CDD F1-ATPase_beta 155 436 - -
Apr8g2498 556 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 210 431 IPR000194 GO:0005524
Apr8g2498 556 ProSitePatterns ATP synthase alpha and beta subunits signature. 422 431 IPR020003 GO:0005524
Apr8g2498 556 CDD ATP-synt_F1_beta_C 438 545 - -
Apr8g2498 556 MobiDBLite consensus disorder prediction 1 37 - -
Apr8g2498 556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 437 IPR027417 -
Apr8g2498 556 PANTHER ATP SYNTHASE 3 554 - -
Apr8g2498 556 CDD ATP-synt_F1_beta_N 83 156 - -
Apr8g2498 556 PIRSF ATPase_subunit_beta 3 555 - -
Apr8g2498 556 Gene3D ATP synthase, F1 beta subunit 1 50 IPR042079 -
Apr8g2498 556 Pfam ATP synthase F1 beta subunit 1 46 IPR020971 GO:0000275|GO:0005524|GO:0006754|GO:0016887
Apr8g2498 556 Gene3D - 73 155 - -
Apr8g2498 556 Gene3D - 434 556 IPR024034 -
Apr8g2498 556 TIGRFAM atpD: ATP synthase F1, beta subunit 84 549 IPR005722 GO:0015986|GO:0045261|GO:0046933
Apr8g2498 556 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 81 155 IPR036121 GO:0046034|GO:1902600
Apr8g2498 556 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 434 550 - -
Apr8g2498 556 Hamap ATP synthase subunit beta [atpB]. 82 549 IPR005722 GO:0015986|GO:0045261|GO:0046933
Apr8g2498 556 PANTHER ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 3 554 - -
Apr8g2498 556 Pfam ATP synthase alpha/beta family, beta-barrel domain 87 153 IPR004100 GO:0046034|GO:1902600
Apr8g2498 556 Gene3D - 156 433 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2498 120 492 Primary Pumps ATPases(2) AT1G20260 28.678 2.12e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2498 K02133 - gmx:100789705 922.924