Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2479 ATGGCGGGTTTTGGCGGGAAAAAGGTGCGCCAAATGGTCGTCGGCTTCGGCGGCAGTGGCCTCGGCCAGGTCGTCATTGCTGTCGCCGTCTCCTTCATCGTCCGCGTCTTCTCCGCTCCCGGCCCCGCCCTCTCTCCGGATAACGACGATGATGACATGCCGGACAACGATTCTCGCAACGGCGAAGCTCCGTCCTCCGGAAAGGTCACGCCGGTCACAATTCGCTGGAATAGCATCAATTGCTCCCTTTCCGATAAATCCTCCAAGTCCGTGAGATTTTTGCTTAAAAATGTGAGTGGAGAAGCAAAGCCTGGGAGATTATTAGCCATAATGGGGCCTTCAGGTTCGGGGAAGACAACATTGCTTAACGTTCTTGCGGGTCAGTTGCAAGCATCTCCTCGGTTGCATTTAAGTGGCATTTTGGAGTTCAATGGAAAGTCTAGTTCTAAGAACGCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTTTTCTCACAGCTCACTGTGCGGGAAACATTGTCTCTAGCTACAGAACTCCAGCTTCCCAGTATATCTTCTGCTGAAGAGAGAGATGAATTCGTGAACAATCTTCTTTTCAAACTAGGCTTGGTTAGTTGTGCTGACACCAATGTTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTAGCGTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACGACAGGTAAGTACCCCTGTCCAGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCGTGGACTACAGTTCTGCTGATAGTGTCTGTTCCTCTCAAAAAAGGATCGATGGTCTTGTTGAGTCATTCTCACAAAGAGTATCAACTGTAATATATGCAACTCCAATTACTATAGATGATTTCTCAAAAAGTAGAAAGAAAATTAGCAAGAGGACTGTAGCAAAGAAGTCAGGGGGTTGGTGGAAGCAGTTTCAGTTGCTTCTTAGAAGGGCATGGATGCAGGCTTCCCGTGATGCTCCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCGATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTTGGCGTGTTTCCAAAGGAACGAGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCCTATTTGTTATCAAAGTTGTTGGCTGAGATTCCCATCGGAGCGGCATTTCCATTAGTGTTTGGTTCTGTTTTGTATCCAATGGCACGTCTTCATCCTACTTTGCAAAGATTTGGAAAATTCTGTGGCATTGTCACTATGGAATCTTTTGCTGCATCTGCTATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTGATGACAGTTTTTATCGTATTTGGAGGTTACTATGTCAATCCAGAGAATACCCCAATCATCTTCCGCTGGATTCCCAATGTTTCTCTGATTAGATGGGCCTTCCAGGGACTCTGCATCAATGAATTTAGTGGTCTTCAATTTGACCATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCACTAGAGCGTATTTCCTTTGGAAGAAGTAGGATTAGGGATACTGTGATAGCACAAAATAGAATACTGCTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAAGCCCTATTGACCTCAACAAACCGCATTTAAAACTTGAGGAGTTGAATTCTGAACAAGTTGATCAGACACTTAAAGCTCCACTGGTCAACCAAGTTGGTTCCAACCAATCCCTTGAGTCAGATGAAGTAGATCTTGTTGGCCCTTTTGTCCTAGAAGGTACTAGGTAA 1980 0.449 MAGFGGKKVRQMVVGFGGSGLGQVVIAVAVSFIVRVFSAPGPALSPDNDDDDMPDNDSRNGEAPSSGKVTPVTIRWNSINCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLQASPRLHLSGILEFNGKSSSKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPSISSAEERDEFVNNLLFKLGLVSCADTNVGDSKVRGISGGEKKRLALACELLASPSVIFADEPTTGKYPCPDHVNPAEFLADLISVDYSSADSVCSSQKRIDGLVESFSQRVSTVIYATPITIDDFSKSRKKISKRTVAKKSGGWWKQFQLLLRRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLLSKLLAEIPIGAAFPLVFGSVLYPMARLHPTLQRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPNVSLIRWAFQGLCINEFSGLQFDHQHSFDVQTGEQALERISFGRSRIRDTVIAQNRILLFWYCTTYLLLEKNKPKYQQLESPIDLNKPHLKLEELNSEQVDQTLKAPLVNQVGSNQSLESDEVDLVGPFVLEGTR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2479 659 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Apr8g2479 659 Gene3D - 68 303 IPR027417 -
Apr8g2479 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 334 IPR003439 GO:0005524
Apr8g2479 659 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524
Apr8g2479 659 Pfam ABC-2 type transporter 331 541 IPR013525 GO:0016020|GO:0140359
Apr8g2479 659 SMART AAA_5 104 305 IPR003593 -
Apr8g2479 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 251 609 - -
Apr8g2479 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 249 - -
Apr8g2479 659 PANTHER ATP-BINDING CASSETTE TRANSPORTER 251 609 - -
Apr8g2479 659 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 249 - -
Apr8g2479 659 MobiDBLite consensus disorder prediction 43 69 - -
Apr8g2479 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 249 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2479 Apr-Chr8 34781177 34790956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2479 94 249 Calmodulin-binding Proteins AT2G36910 27.607 7.17e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2479 K05681 - nnu:104587769 893.264