Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2458 ATGAACCTTAACTCCAATAATCTCCATTTGTGGTGGAGAGTCTCTTCCTTCCTTCTTCTACTGCTTCAATCTGCCGCAGCTCTTAACTCTGATGGGGTTCTCTTGCTTAAATTCAAATACTCCATCCTCAGTGACCCGCTTTCAGTTTTAGAGAGCTGGAACTATGATGATGCAACTCCATGTTCATGGGTTGGAGTCACATGCACTGAAATTGGAGCACCTGGCACCCCTGATTTGTTCAGAGTAACTAGCTTGGTCCTTCCAAATAGCCAGCTTTTGGGTTCCATTGCTGAAGCCTTAGGCATGATCCAGTACCTTCGACACATCGATCTCTCCAACAACTTCCTCAATGGGTCTCTACCCAACTCTGTCTTCAACTCTTCGCAGCTTCAAGTTCTTTCTCTCTCAAACAATGTCATCTCAGGAGAGCTACCTGACTTGGTTGGTAAAATGACAAGGCTTCAAATTCTCAACCTTTCTGACAATGCCTTTGCTGGGTTGATCCCAGAAAATCTCACTGCTTTACAAAACTTAGCCGTTGTTTCTTTGAAAAGTAACTATTTTTCTGGTAGTGTCCCAAGTGGGTTCAACTATGTGGAGAATTTGGATCTGTCCTCCAATTTGCTCAATGGTTCTCTTCCAAATGACTTTGGTGGTGAAAACTTGCGCTACTTGAACCTCTCTTATAACAAGATTTCAGGAACAATACCACCAACATTTGCCAAACAGATTCCTGAAAACACCACAATTGACCTCTCCTTCAACAATCTGGCAGGCCCAATACCAGGGTCCGGGGCTTTGCTCAACCAGAAAACTGAGTTCCTATCAGGAAATGCTGATCTTTGCGGTAAGCCTCTAAAGATTCTATGCACTGTCCCCTCTACTATGTCCACTCCTCCACCCAATGTCACCGATTCTTCACCAGCAATTGCAGCCATACCCAAAACAATTGACTCAAACCCTTCAACAAACACCACAGGAAGCTCAAACGGTTCTCAGAATGTGTCAGCAAGTGGCCTAAAACCCGCTACCATAGCAGGAATTGTGGTAGGAGACTTGGCTGGCATGGCCCTTTTGGCCCTCATCATTCTCTTCGTCTACCAACAGAGAAAGAAAAGAGATCCAAAAACGAGCACTGATGCGGTTACTATTATCACCAACTCAGAAAAGGAGGAAAGCGTGGCAAAACAAGAAGCAGAAGCGAGAACAGTTACACACTCTCTTCCATGTTCTTGCTTAACAATCAAAGAGGAAGAAACTTCAGAAGCAACAACCTCTGATAGTGACCATGAGAACAATACTGCAGTGGACATAATCACAGCACAAAACGGGAACCTTCCAAGAGAAGGCACTCTTGTTACGGTCGACGGGGAAACAAGGCTTGAGCTTGAGACTTTGCTTAAGGCTTCAGCGTATATTTTGGGAAATAGCCGAGTAAGCATCGTGTACAAAGCAGTGCTCGAAGATGGAAGAACATTTGCTGTTAGAAGGATTGGTGAGTGTGTGATTGAGAGAATGAAGGACTTTGAGAACCAAGTGCGTGCCATTGCAAAGCTTCGCCATCAAAACTTGCTTAAGGTTCGTGCCTTTTGCTGGGGTCAAGAAGAAAAACTTGTAATCTGTGACTATGTTCCCAATGGCAGCCTCGCTACCGTCGGTTACAGAAGAACGGGTTCGTCTCCTATGAACTTGTCCTTGGAGATGCGGTTGAAGATTGCAAAAGGGGTAGCACGAGGCTTGGCCTTCATTCATGAGAAGAAACACGTGCATGGCAATGTTAAACCGAGCAACATCTTGTTAAACTCAGAAATGGAACCCATAATCAGCGATTTTGGGTTGGACCGGCTTCTCTTGAATGATATTAACCACGGTTCAGCTAGGCAATTAATGGTGAACCAAAGAACCCAACAAGACCCTCCTCCATTTGGTTCATCGTCGTCTAGTAGTGTGACCCAAATGCCCTATCAAGCACCAGAGTCATTTCAGAACATGAAACCAAACCCCAAATGGGACGTGTATTCTTTTGGGGTGGTCTTGTTGGAGCTTCTCAGTGGGAGGGTTTTCTCGGACCGGGAATGGGAGCAGTGGCATGAACCCGGTTCAGTGGAAGATGAGAAAAACAGGGTTTTAAGGATGGCTGACGTGGCAATAAGGTGTGAGATGGAAGGGAGGGAAAATGTGATAATGGTATGCTTCAAGTTAGGACTTAGCTGTGCCTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAGGTTTTACAAGTCTTAGAGAAGATACCTTCTGCTTCCGCTAATTAA 2298 0.4513 MNLNSNNLHLWWRVSSFLLLLLQSAAALNSDGVLLLKFKYSILSDPLSVLESWNYDDATPCSWVGVTCTEIGAPGTPDLFRVTSLVLPNSQLLGSIAEALGMIQYLRHIDLSNNFLNGSLPNSVFNSSQLQVLSLSNNVISGELPDLVGKMTRLQILNLSDNAFAGLIPENLTALQNLAVVSLKSNYFSGSVPSGFNYVENLDLSSNLLNGSLPNDFGGENLRYLNLSYNKISGTIPPTFAKQIPENTTIDLSFNNLAGPIPGSGALLNQKTEFLSGNADLCGKPLKILCTVPSTMSTPPPNVTDSSPAIAAIPKTIDSNPSTNTTGSSNGSQNVSASGLKPATIAGIVVGDLAGMALLALIILFVYQQRKKRDPKTSTDAVTIITNSEKEESVAKQEAEARTVTHSLPCSCLTIKEEETSEATTSDSDHENNTAVDIITAQNGNLPREGTLVTVDGETRLELETLLKASAYILGNSRVSIVYKAVLEDGRTFAVRRIGECVIERMKDFENQVRAIAKLRHQNLLKVRAFCWGQEEKLVICDYVPNGSLATVGYRRTGSSPMNLSLEMRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPIISDFGLDRLLLNDINHGSARQLMVNQRTQQDPPPFGSSSSSSVTQMPYQAPESFQNMKPNPKWDVYSFGVVLLELLSGRVFSDREWEQWHEPGSVEDEKNRVLRMADVAIRCEMEGRENVIMVCFKLGLSCASLVPQKRPSMKEVLQVLEKIPSASAN* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2458 765 ProSiteProfiles Leucine-rich repeat profile. 221 243 IPR001611 GO:0005515
Apr8g2458 765 MobiDBLite consensus disorder prediction 316 336 - -
Apr8g2458 765 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 23 762 - -
Apr8g2458 765 Gene3D Phosphorylase Kinase; domain 1 450 543 - -
Apr8g2458 765 CDD STKc_IRAK 474 759 - -
Apr8g2458 765 SUPERFAMILY L domain-like 31 288 - -
Apr8g2458 765 Gene3D Ribonuclease Inhibitor 197 292 IPR032675 -
Apr8g2458 765 SUPERFAMILY Protein kinase-like (PK-like) 473 757 IPR011009 -
Apr8g2458 765 Gene3D Transferase(Phosphotransferase) domain 1 544 765 - -
Apr8g2458 765 Pfam Protein kinase domain 473 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2458 765 Pfam Leucine Rich Repeat 106 124 IPR001611 GO:0005515
Apr8g2458 765 Pfam Leucine Rich Repeat 221 241 IPR001611 GO:0005515
Apr8g2458 765 MobiDBLite consensus disorder prediction 314 336 - -
Apr8g2458 765 CDD TM_EGFR-like 344 373 - -
Apr8g2458 765 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Apr8g2458 765 ProSiteProfiles Protein kinase domain profile. 468 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2458 765 PANTHER OS04G0122200 PROTEIN 23 762 - -
Apr8g2458 765 Gene3D Ribonuclease Inhibitor 28 196 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2458 Apr-Chr8 34631893 34635151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2458 27 759 Receptor kinase-like Gene Family AT2G15300 51.596 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr8g2458 Pkinase 8.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2458 - - gmx:100820334 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2458 8 34631893 34635151 Apr8g2458 8 34631893 34635151 ECH