Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2444 ATGGAGACCAAAGAGGAATTTGCAGTAGTGGACCATCTGACCACACCCGCAGGGACCAGTTTTTCTCAGTTACTATTCGGAGATGACGATGATGAAAATGCATTGGGTCTTGGTGTGGACCATACTTACAACCTCACCCATTCCCCTCTTTTCTCCATTCACAAGGCACCCAAAATGCTTTCTTTTGCCAATGAAGGCGACGTTTTGCTTCCTGAAACCAACGTCACCCCCCAGAAATCTGTCATCACTTCCAGTGATTCTTCATCTGCTTCTTCTTGCAACTATGCCAACACAGCCTTCACTACTTCCTTACCTAAGTCAAATGTCTGTGATAGCATTTTTTTTTTATTGGTTTGCAATTGGAGAATGATCTTGTCATTATTGATTTTTATTTTCTTTTGGTTGAAGAATTTGCAGAAAAAAAGAAACGGGTCGGGACATGAACCGGTGGTTAAGCCAGGTATGGGAGGCCAGAAACAGCCTAAGAAGATCAAAGAAGAGAACCCCACTTCAAGCCTGCATGCAAAGAGGAAGGAGAAGCTTGGGGAGCGAATTGCAGCATTACAACAGCTCGTGTCTCCCTTTGGCAAGACAGATACAGCATCAGTGCTTCACGAGGCCATGGGGTATATAAGATTTCTACATGACCAAGTTCAGGTCCTGTGCACTCCTTACCTGCAAAGTTTGCCATCCTCATACAATCAACGTCAGCATGGGGACGGAGATAACAATGAAGAGGAAGTGAACAAGGACTTGAGGAGTAGGGGTCTCTGCTTGATCCCTGTGGGATGCACCATACACGTGGCAGGTAGCAATGGTGCTGATTTTTGGTCACCTGCTGCAATAGGGAACAATGTTTCACCATCAGCCAAGCAGTGA 879 0.4551 METKEEFAVVDHLTTPAGTSFSQLLFGDDDDENALGLGVDHTYNLTHSPLFSIHKAPKMLSFANEGDVLLPETNVTPQKSVITSSDSSSASSCNYANTAFTTSLPKSNVCDSIFFLLVCNWRMILSLLIFIFFWLKNLQKKRNGSGHEPVVKPGMGGQKQPKKIKEENPTSSLHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCTPYLQSLPSSYNQRQHGDGDNNEEEVNKDLRSRGLCLIPVGCTIHVAGSNGADFWSPAAIGNNVSPSAKQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2444 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 226 IPR036638 GO:0046983
Apr8g2444 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 272 - -
Apr8g2444 292 MobiDBLite consensus disorder prediction 143 176 - -
Apr8g2444 292 MobiDBLite consensus disorder prediction 159 176 - -
Apr8g2444 292 CDD bHLH_AtbHLH_like 176 221 IPR045239 -
Apr8g2444 292 Gene3D - 171 235 IPR036638 GO:0046983
Apr8g2444 292 PANTHER TRANSCRIPTION FACTOR BHLH114 79 272 - -
Apr8g2444 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2444 Apr-Chr8 34534011 34535925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2444 176 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 58.095 8.34e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2444 - - aprc:113873132 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2444 8 34534011 34535925 Apr8g2444 8 34534011 34535925 ECH