Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2430 ATGCTGCGTCTGTGCTACGCCCCTTTCGATTGTTGCTTCCGACGACCAAGGGCCGCCGCCGACGCCCTTCTCTGGCATACCGACTTGAAGCCTCACGCTTCCGGCGACTTCTCCATCGCCGTCGCTCAAGCCAATTACAGCCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACTTACGTCGGAGTCTACGACGGCCACGGCGGCCCCGAAGCTTCTAGATTCGTCAACAAGCGTCTCTTCCCTTATTTGCAGAAATTTGCCACCGAACAAGGGGGGTTATCGGTGGAGGTGATAAAGAAGGCGTTTAGTGCCACAGAGGAGGAATTCTTGCATTTGGTGAAGCTATCGTTGCCTATTAGTCCTCAGATTGCTTCCGTGGGATCCTGTTGCCTTCTTGGTGCAATTTCTAATAATGTGTTGTATGTAGCCAATCTTGGAGACTCGAGAGCTGTTCTTGGCAGGAGGGATACAGAGAGCAAAAATTGTCCGGTGGTGGCAGAGCGCTTGTCCACCGATCATAATGTAGCTGATGAGGAGGTAAGGAGAGAAGTTGAAGCTCTCCATCCTGATGATTCACACATTGTGGTTTATAGCCGCGGAGTCTGGAGGATTAAGGGCATCATACAGGTGTCAAGATCTATTGGTGATGTGTATTTGAAGAAACCTGATTTTTACCGAGACCCAGTTTTTCAGCAACTTGGAAATCCTGTTCCTTTGAAGCGTCCTGTAATGACTGCTGAACCATCAATCATTATTAGGGAGCTTGAGTCAGAGGATTTATTCTTGATATTTGCATCAGATGGCCTCTGGGAACAACTAAGTGATGAAGCAGCCGTTCAGATAGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCTGCTCTTCAGGAAGCTGCAAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATTGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTAATTGTTATCTATCTTGATCACCAGGTGGCCTCCTCTAATAATAGATTTAAGCAAACTGCTGTTGGCTATACAACTGCCCCTGTTGATATTTTTTCTCTAAATGTGGATGAAGCAGAAAAGAGTATGCTTGGTACAGTTGCCTAA 1143 0.4672 MLRLCYAPFDCCFRRPRAAADALLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLQKFATEQGGLSVEVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLLGAISNNVLYVANLGDSRAVLGRRDTESKNCPVVAERLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQLGNPVPLKRPVMTAEPSIIIRELESEDLFLIFASDGLWEQLSDEAAVQIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHQVASSNNRFKQTAVGYTTAPVDIFSLNVDEAEKSMLGTVA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2430 380 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Apr8g2430 380 SMART PP2C_4 30 336 IPR001932 -
Apr8g2430 380 Pfam Protein phosphatase 2C 57 307 IPR001932 -
Apr8g2430 380 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 375 - -
Apr8g2430 380 PANTHER ALPHABET, ISOFORM E-RELATED 4 375 - -
Apr8g2430 380 Gene3D - 26 350 IPR036457 -
Apr8g2430 380 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
Apr8g2430 380 CDD PP2Cc 49 338 IPR001932 -
Apr8g2430 380 SUPERFAMILY PP2C-like 45 339 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2430 Apr-Chr8 34439387 34442183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2430 21 345 PP2C-type Phosphatase Gene Family AT3G51370 57.357 3.94e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2430 - K01102 gmx:100812137 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2430 8 34439387 34442183 Apr8g2430 8 34439387 34442183 ECH
Apr7g0863 7 15638752 15642287 Apr8g2430 8 34439387 34442183 PCT